G417939


Basic Information

Item Value
gene id G417939
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 137134 ~ 137631 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480077
CTTTTTAATGCCAATTTTTAAATTTTTAATGCCATATATATGTCGGTAAATGTTGATAGATGACATCAAAAAGCAATTAGAATATTCATCATGTCATTGTTGCATTCGCATTCTGCCAAGTGTCAGCCCTTTACATTTGTTTGCTTCTCTGGTGCTACCCTTTTTGCTCACATAATATATTTTAATACAGCCAAATTCCCAATAAAATTGTTTCATCTATATATTTTTCTGTTTTTGTTGTCAGAAAATATGCAATGGTGCCTGAAACGTGG
>TU480078
CTTTTTAATGCCAATTTTTAAATTTTTAATGCCATATATATGTCGGTAAATGTTGATAGATGACATCAAAAAGCAATTAGAATATTCATCATGTCATTGTTGCATTCGCATTCTGCCAAGTGTCAGCCCTTTACATTTGTTTGCTTCTCTGGTGCTACCCTTTTTGCTCACATAATATATTTTAATACAGCCAAATTCCCAATAAAATTGTTTCATCTATATATTTTTCTGTTTTTGTTGTCAGAAAATATGCAATGGTGCCTGAAACGTGGCCCATCAAGACTACATACAGGGCTCGACATACAGCCTTTTCATTCACTTGTACGATTCTTGTATGATTCATGTAAAATGTATGATTCATCTTTCATTTTAAATTCTTAAATTCGATCAATAAATTTAATTAGAATAAGACACTAAGGGCTGTTACCAATCAAATTAAATAATTTACGAATTTACAAAAAAAAAAAAAAAAATTACAACTGCATCAAATAATGTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480077 False 272 lncRNA 0.32 1 137134 137405
TU480078 True 498 lncRNA 0.29 1 137134 137631

Neighbor

gene id symbol gene type direction distance location
CI01000304_00047400_00073206 NA coding upstream 63796 46322 ~ 73338 (+)
CI01000304_00292894_00306187 PHAX coding downstream 155263 292894 ~ 306479 (+)
CI01000304_00308220_00310793 NA coding downstream 170042 307673 ~ 311267 (+)
CI01000304_00315935_00342330 LMNB1 coding downstream 177111 314742 ~ 342531 (+)
CI01000304_00370333_00419672 MEGF10 coding downstream 232702 370333 ~ 420755 (+)
CI01000304_00424703_00434890 PRRC1 coding downstream 287072 424703 ~ 435066 (+)
G417937 NA non-coding upstream 2001 134846 ~ 135133 (+)
G417900 NA non-coding upstream 47875 86960 ~ 89259 (+)
G417907 NA non-coding upstream 91345 45537 ~ 45789 (+)
G417904 NA non-coding upstream 110890 26033 ~ 26244 (+)
G417941 NA non-coding downstream 1582 139213 ~ 139451 (+)
G417942 NA non-coding downstream 1901 139532 ~ 139853 (+)
G417943 NA non-coding downstream 2512 140143 ~ 140471 (+)
G417944 NA non-coding downstream 3187 140818 ~ 141241 (+)
G417945 NA non-coding downstream 3923 141554 ~ 141798 (+)
G417987 NA other downstream 89072 226703 ~ 227853 (+)
G418059 NA other downstream 420461 558092 ~ 564451 (+)
G418116 NA other downstream 735039 872670 ~ 875249 (+)
G418981 NA other downstream 1954863 2092494 ~ 2093678 (+)
G420445 NA other downstream 4165705 4303336 ~ 4303832 (+)

Expression


Co-expression Network