G417901


Basic Information

Item Value
gene id G417901
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 168520 ~ 268210 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480036
TAGTGAAGATACTGCTAGAGAGCCCTTGTTTCACTTCATTATTCCAGGCAAATGCCTCGTCCTCTGTCTTGAATTTAAGTACATAAAGGATAGGCACAAAGGTCTCTGTGTGAACTATGGGAGCGTCATGTGGCAGTCCGGTGATAATAGTTGGTTCCACATAGTTACCTGGGCGATCCATAATCTTTTCCCCCGCACACAAGAGTGCCACCCTGCTGCTTCGCTTGCTCTATGGCTGCCAGATACTGTTGAACAGCCTGTTTGGTGTGCAGAGGTCCATAAAGAGTGTTTGGATCCCAGGGGTCACCGATGCGGATCTGCTGGTAAGCTTTAGTGATTCTCTCCACAACCTCGTCATGTACACTTTCATGCAGCATCAGTCGTCTGGTAGTAGTGCATCGCTGGCCAGCCGTTCCCACAGAGGCGAAGACAGCAGACGGCACAACCAGATTAAGATCAGCATCGTCAAACACTATGATGGCGTTATTTCCTCCCAGCTCCAGTAGCTGACGACCGAACCGCTCTTGTACCATCATGGCCACCTTTTTGCCCACATGAGTGCTGCCTGTGAAGGACAGTAGACCCACTCGCTCATCTTTTGCCATGGCTGTGCCAATGTCAGCGCCACCGCACGTCATAGAACAAATCGCACCAGGAAGATGGTTGTGCTCCAACACCTCAGCTACAATCTTTGTAATGGCAACGCTTGTGAGGGGTGTTGTCGGAGCTCCTTTCCAAAGACAGACGTTGCCGCAGATGAGAGCGATGGCGTTGTTCCAGCCATATACAGCCACAGGAAAGTTAAAGGCAGTGATGATTCCTACCAAGCCAACAGGATTCCACTGCTCGATCAGTGCATGACCCGGCCTTCAGAAGGTAAAATTGGTCCGCCGATCATACGTGACAGCCCTACAGCATAGTCACACACGTCCACATACTCCTGCACCTCACCAACACCCTCCACAAAGATCTTGCCCATTTCCAGAGACACCAAGCTGCCGAGAGCTTTGATCTTCCTTCTTAAAGCCTCTCCAATCTGTCGAACGATTTCACCTCTTTTTGGAGCAGGAACATCTGCCCACACTTTCCATGCATCTTGTGCTTTCTGTACGGTTTCCTCATATTCTGCTATGGTTGCCTGACGCACTCTGGCAATGGCCTCATTGTTGGCTGGACAGTATGAAGTTACCACCTCTCCCCGTCCTCCCCATGAGCCGTTATAAACGCCGTCATTGTCCTCATTAAGGCCTAACTCTTTCAACCAACTGTAATTTGGTTGGTTAATGAGCAATGCTGACATGTTCGCTGCTGCTGGTCGGACACTCAGCGACAGTTTATTCCTCAAAAAGAAGAGCCGCGCAAGTCTCTGCGTCAGCACGCGCTGCATAGTGAACTGACTAACAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480036 True 1406 lncRNA 0.50 15 168520 268210

Neighbor

gene id symbol gene type direction distance location
CI01000304_00047400_00073206 NA coding upstream 95182 46322 ~ 73338 (+)
CI01000304_00292894_00306187 PHAX coding downstream 24684 292894 ~ 306479 (+)
CI01000304_00308220_00310793 NA coding downstream 39463 307673 ~ 311267 (+)
CI01000304_00315935_00342330 LMNB1 coding downstream 46532 314742 ~ 342531 (+)
CI01000304_00370333_00419672 MEGF10 coding downstream 102123 370333 ~ 420755 (+)
CI01000304_00424703_00434890 PRRC1 coding downstream 156493 424703 ~ 435066 (+)
G417963 NA non-coding upstream 3848 164220 ~ 164672 (+)
G417962 NA non-coding upstream 5191 162546 ~ 163329 (+)
G417960 NA non-coding upstream 7261 160094 ~ 161259 (+)
G417946 NA non-coding upstream 26034 142090 ~ 142486 (+)
G417945 NA non-coding upstream 26722 141554 ~ 141798 (+)
G418024 NA non-coding downstream 9051 277261 ~ 277982 (+)
G418023 NA non-coding downstream 11683 279893 ~ 281026 (+)
G418047 NA non-coding downstream 172374 440584 ~ 440872 (+)
G418050 NA non-coding downstream 202005 470215 ~ 470572 (+)
G418056 NA non-coding downstream 210469 478679 ~ 478899 (+)
G418059 NA other downstream 289882 558092 ~ 564451 (+)
G418116 NA other downstream 604460 872670 ~ 875249 (+)
G418981 NA other downstream 1824284 2092494 ~ 2093678 (+)
G420445 NA other downstream 4035126 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4905013 5173426 ~ 5176791 (+)

Expression


Co-expression Network