G417984


Basic Information

Item Value
gene id G417984
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 223015 ~ 223919 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480128
CGCGCACGCGCACACCAGGCCTTTGTCTGTGAAATATCCACCGCGTGTCTTTGCAGCATGTGGAATTGTCAGTGGGAGTAAACAGTTCTCGCGCACACTGAACGAGCAGGTACGAAACGTGTAGAGCGAGGGGAGACTTTCCAATACCTAGTTAGTGGCCGTTCACATGTCACGTCTTTTGCGCATTCAAGTTCGTTATTTTAAAATGTAGACACGGGACGGACTCTGCCAAGATGGACTAACAGCTGATCATACCTGTACAGGGCGTTTTTTTTTTATTTCTTATCTCCATAAGTAGTAGTATAATCTAGTAGTAAAGCTAATGCAACAGAGAGAGAGAGTGAAAAATCCACATTCAAACCAAAATATCTGACTTCCTGTTGGTTGGAGCTAATGACTGTAAATTAGAAAGTTGTCCGGCTTAATGAGAACAATGTGTGTACCGAGTTTGGTGACTGTAGGTAAAAAGGGTTATCTCAAAGCATTTTGAAAGTGACACTTCCTACTGCCAGTTGGTGGCACTATAACTTTGACTCACAATAGTCACATCCATGTGATCGGACTCCTACAACGAACACACAGCTGAAGTTTCATAAAAATCAATCAATGTATATATAAGTTATAACACTTCCTTTTACCCTTTTCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480128 True 648 lncRNA 0.42 2 223015 223919

Neighbor

gene id symbol gene type direction distance location
CI01000304_00047400_00073206 NA coding upstream 149677 46322 ~ 73338 (+)
CI01000304_00292894_00306187 PHAX coding downstream 68975 292894 ~ 306479 (+)
CI01000304_00308220_00310793 NA coding downstream 83754 307673 ~ 311267 (+)
CI01000304_00315935_00342330 LMNB1 coding downstream 90823 314742 ~ 342531 (+)
CI01000304_00370333_00419672 MEGF10 coding downstream 146414 370333 ~ 420755 (+)
CI01000304_00424703_00434890 PRRC1 coding downstream 200784 424703 ~ 435066 (+)
G417963 NA non-coding upstream 58343 164220 ~ 164672 (+)
G417962 NA non-coding upstream 59686 162546 ~ 163329 (+)
G417960 NA non-coding upstream 61756 160094 ~ 161259 (+)
G417946 NA non-coding upstream 80529 142090 ~ 142486 (+)
G417945 NA non-coding upstream 81217 141554 ~ 141798 (+)
G418024 NA non-coding downstream 53342 277261 ~ 277982 (+)
G418023 NA non-coding downstream 55974 279893 ~ 281026 (+)
G418047 NA non-coding downstream 216665 440584 ~ 440872 (+)
G418050 NA non-coding downstream 246296 470215 ~ 470572 (+)
G417987 NA other downstream 2784 226703 ~ 227853 (+)
G418059 NA other downstream 334173 558092 ~ 564451 (+)
G418116 NA other downstream 648751 872670 ~ 875249 (+)
G418981 NA other downstream 1868575 2092494 ~ 2093678 (+)
G420445 NA other downstream 4079417 4303336 ~ 4303832 (+)

Expression


Co-expression Network