Gene
RNA
| Item | Value |
|---|---|
| gene id | G418372 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 441972 ~ 442201 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480560 | True | 230 | lncRNA | 0.31 | 1 | 441972 | 442201 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_00348539_00351333 | NA | coding | downstream | 90639 | 347671 ~ 351333 (-) |
| CI01000304_00167148_00268194 | ALDH7A1 | coding | downstream | 173778 | 167148 ~ 268194 (-) |
| CI01000304_00140443_00163606 | NA | coding | downstream | 278289 | 139690 ~ 163683 (-) |
| CI01000304_00088915_00116828 | NA | coding | downstream | 325144 | 88164 ~ 116828 (-) |
| CI01000304_00670372_00671143 | NA | coding | upstream | 227075 | 669276 ~ 671143 (-) |
| CI01000304_00682765_00692613 | NA | coding | upstream | 240308 | 682509 ~ 692656 (-) |
| CI01000304_00748608_00750261 | NA | coding | upstream | 306114 | 748315 ~ 751532 (-) |
| CI01000304_00843412_00844705 | HINT1 | coding | upstream | 401094 | 843295 ~ 844705 (-) |
| CI01000304_00852998_00861119 | PPP2CA, PPP2CB, CDKL3 | coding | upstream | 410745 | 852946 ~ 861367 (-) |
| G418292 | NA | non-coding | downstream | 78240 | 349088 ~ 363732 (-) |
| G418276 | NA | non-coding | downstream | 99469 | 285315 ~ 342503 (-) |
| G418280 | NA | non-coding | downstream | 111081 | 324350 ~ 330891 (-) |
| G418271 | NA | non-coding | downstream | 135062 | 292906 ~ 306910 (-) |
| G418387 | NA | non-coding | upstream | 28040 | 470241 ~ 470460 (-) |
| G418391 | NA | non-coding | upstream | 104273 | 546474 ~ 549437 (-) |
| G418441 | NA | non-coding | upstream | 138160 | 580361 ~ 580717 (-) |
| G418450 | NA | non-coding | upstream | 160952 | 603153 ~ 603576 (-) |
| G418451 | NA | non-coding | upstream | 164197 | 606398 ~ 607640 (-) |
| G419353 | NA | other | upstream | 1787183 | 2229384 ~ 2236106 (-) |
| G419354 | NA | other | upstream | 1820301 | 2262502 ~ 2266241 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 3821544 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 4219615 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 6035250 | 6480743 ~ 6483986 (-) |
