Gene
RNA
| Item | Value |
|---|---|
| gene id | G418050 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 470215 ~ 470572 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480212 | False | 259 | lncRNA | 0.45 | 1 | 470215 | 470473 |
| TU480214 | True | 358 | lncRNA | 0.41 | 1 | 470215 | 470572 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_00453663_00453991 | CTXN3 | coding | upstream | 14975 | 453663 ~ 455240 (+) |
| CI01000304_00424703_00434890 | PRRC1 | coding | upstream | 35149 | 424703 ~ 435066 (+) |
| CI01000304_00370333_00419672 | MEGF10 | coding | upstream | 49460 | 370333 ~ 420755 (+) |
| CI01000304_00315935_00342330 | LMNB1 | coding | upstream | 127692 | 314742 ~ 342531 (+) |
| CI01000304_00308220_00310793 | NA | coding | upstream | 158948 | 307673 ~ 311267 (+) |
| CI01000304_00480135_00531529 | NA | coding | downstream | 9209 | 479781 ~ 532037 (+) |
| CI01000304_00695426_00725459 | SLC27A6 | coding | downstream | 223889 | 694461 ~ 725459 (+) |
| CI01000304_00728178_00731945 | ISOC1, ISOC1.L | coding | downstream | 257384 | 727956 ~ 732274 (+) |
| CI01000304_00757894_00760456 | NA | coding | downstream | 287322 | 757894 ~ 760660 (+) |
| CI01000304_00772995_00827316 | CHSY3 | coding | downstream | 300461 | 771033 ~ 827608 (+) |
| G418047 | NA | non-coding | upstream | 29343 | 440584 ~ 440872 (+) |
| G418023 | NA | non-coding | upstream | 189189 | 279893 ~ 281026 (+) |
| G418024 | NA | non-coding | upstream | 192233 | 277261 ~ 277982 (+) |
| G417901 | NA | non-coding | upstream | 202005 | 168520 ~ 268210 (+) |
| G418056 | NA | non-coding | downstream | 8107 | 478679 ~ 478899 (+) |
| G418004 | NA | non-coding | downstream | 51112 | 521684 ~ 526522 (+) |
| G418003 | NA | non-coding | downstream | 79701 | 550273 ~ 551981 (+) |
| G418058 | NA | non-coding | downstream | 87019 | 557591 ~ 557792 (+) |
| G418077 | NA | non-coding | downstream | 126714 | 597286 ~ 597663 (+) |
| G417987 | NA | other | upstream | 242362 | 226703 ~ 227853 (+) |
| G418059 | NA | other | downstream | 87520 | 558092 ~ 564451 (+) |
| G418116 | NA | other | downstream | 402098 | 872670 ~ 875249 (+) |
| G418981 | NA | other | downstream | 1621922 | 2092494 ~ 2093678 (+) |
| G420445 | NA | other | downstream | 3832764 | 4303336 ~ 4303832 (+) |
| CI01000304_05173869_05175309 | NRARP, NRARP.L, NRARPA, NRARPB | other | downstream | 4702651 | 5173426 ~ 5176791 (+) |
