G418088


Basic Information

Item Value
gene id G418088
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 606641 ~ 606958 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480253
ATGTGATTTGAAACAGGTGATGTCAACAGGTGATTGTAATTATGATTTGGTACAAAAGCAGCATCCAAGAAAGGTCTAGTCCTTTAGGAGCAAAGATGGGCCGAGGATCGCCAGTTTGCCAACAAATACGTGAGAAAATTATTGAAATGTTTAAAAACAATGTTCCTCAAAGAAAGATAGGAAGACATTTGCTTATTTCACCTTCAACAGTGCATAACATAATTAAAAGATTCAAGGAATGTGGAGGAATTTCAGTGCGTAAAGGACAAGGGCGCAAGCCTAAGCTGAACAACCGTGATCTCCGATCCCTCAGGCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480253 True 318 lncRNA 0.40 1 606641 606958

Neighbor

gene id symbol gene type direction distance location
CI01000304_00480135_00531529 NA coding upstream 74604 479781 ~ 532037 (+)
CI01000304_00453663_00453991 CTXN3 coding upstream 151401 453663 ~ 455240 (+)
CI01000304_00424703_00434890 PRRC1 coding upstream 171575 424703 ~ 435066 (+)
CI01000304_00370333_00419672 MEGF10 coding upstream 185886 370333 ~ 420755 (+)
CI01000304_00315935_00342330 LMNB1 coding upstream 264118 314742 ~ 342531 (+)
CI01000304_00695426_00725459 SLC27A6 coding downstream 87503 694461 ~ 725459 (+)
CI01000304_00728178_00731945 ISOC1, ISOC1.L coding downstream 120998 727956 ~ 732274 (+)
CI01000304_00757894_00760456 NA coding downstream 150936 757894 ~ 760660 (+)
CI01000304_00772995_00827316 CHSY3 coding downstream 164075 771033 ~ 827608 (+)
CI01000304_00846138_00850133 NA coding downstream 239101 846059 ~ 850379 (+)
G418086 NA non-coding upstream 1069 605265 ~ 605572 (+)
G418085 NA non-coding upstream 1796 604634 ~ 604845 (+)
G418083 NA non-coding upstream 3163 603093 ~ 603478 (+)
G418081 NA non-coding upstream 5263 601112 ~ 601378 (+)
G418079 NA non-coding upstream 5888 600540 ~ 600753 (+)
G418089 NA non-coding downstream 11647 618605 ~ 618901 (+)
G418090 NA non-coding downstream 12267 619225 ~ 624190 (+)
G418093 NA non-coding downstream 18440 625398 ~ 625598 (+)
G418132 NA non-coding downstream 21363 628321 ~ 628526 (+)
G418134 NA non-coding downstream 25374 632332 ~ 632665 (+)
G418059 NA other upstream 42190 558092 ~ 564451 (+)
G417987 NA other upstream 378788 226703 ~ 227853 (+)
G418116 NA other downstream 265712 872670 ~ 875249 (+)
G418981 NA other downstream 1485536 2092494 ~ 2093678 (+)
G420445 NA other downstream 3696378 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4566265 5173426 ~ 5176791 (+)
G421162 NA other downstream 5634275 6241233 ~ 6242997 (+)

Expression


Co-expression Network