G418454



Basic Information


Item Value
gene id G418454
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 610899 ~ 611174 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU480650
CAGCACGCCTGGGATGTGAATGGCACGAAGCGACCTCAGATGCTTCTGACTCCATAAGAGGAGATGGCGGGTGAGTTGCGACATGTGACGGGAGCGTAGATCGCCCTGGTGGTTGATGTACGCAACAGTTGCAGTGTTGTCTGTACGGACCAGTACATGCTTGCCTAGTAGCAGCTGTTTGAAGCGGCCCAGCGCAAGACGTACTGCTAGCAACTCGAGGCAATTGATATGCCACTGCAGTTGAGGCCCCGTCCACAGACCCGAGACTGCATGCCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU480650 True 276 lncRNA 0.57 1 610899 611174

Neighbor


gene id symbol gene type direction distance location
CI01000304_00348539_00351333 NA coding downstream 259566 347671 ~ 351333 (-)
CI01000304_00167148_00268194 ALDH7A1 coding downstream 342705 167148 ~ 268194 (-)
CI01000304_00140443_00163606 NA coding downstream 447216 139690 ~ 163683 (-)
CI01000304_00088915_00116828 NA coding downstream 494071 88164 ~ 116828 (-)
CI01000304_00670372_00671143 NA coding upstream 58102 669276 ~ 671143 (-)
CI01000304_00682765_00692613 NA coding upstream 71335 682509 ~ 692656 (-)
CI01000304_00748608_00750261 NA coding upstream 137141 748315 ~ 751532 (-)
CI01000304_00843412_00844705 HINT1 coding upstream 232121 843295 ~ 844705 (-)
CI01000304_00852998_00861119 PPP2CA, PPP2CB, CDKL3 coding upstream 241772 852946 ~ 861367 (-)
G418452 NA non-coding downstream 2976 607703 ~ 607923 (-)
G418451 NA non-coding downstream 3259 606398 ~ 607640 (-)
G418450 NA non-coding downstream 7323 603153 ~ 603576 (-)
G418441 NA non-coding downstream 30182 580361 ~ 580717 (-)
G418391 NA non-coding downstream 61462 546474 ~ 549437 (-)
G418456 NA non-coding upstream 1912 613086 ~ 613313 (-)
G418464 NA non-coding upstream 16721 627895 ~ 628275 (-)
G418467 NA non-coding upstream 23018 634192 ~ 634411 (-)
G418471 NA non-coding upstream 26901 638075 ~ 638312 (-)
G418477 NA non-coding upstream 35132 646306 ~ 646610 (-)
G419353 NA other upstream 1618210 2229384 ~ 2236106 (-)
G419354 NA other upstream 1651328 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 3652571 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 4050642 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 5866277 6480743 ~ 6483986 (-)

Expression



Co-expression Network