G418142


Basic Information

Item Value
gene id G418142
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 644260 ~ 644561 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480308
ACTACATTATCGTGTCAGATAGTGCATTGTAGTGTCCCTGAGGAAAAATTCAATTCATTTACTGCTTTAGGAGAGGAAGAATTGTCTAAACTTGTTAAATCATCAAAATCAACAACATGTATGTTAGACCCTATACCGACTAAGCTATTGAAAGAAATGCTTCCAGAGGTCATAGATCCTCTTCTTAATATCGTCAATTCATCTTTATCACTAGGACACATACCAAAAACTTTTAAGCTGGCTATTATTAAACCTCTTATTAAAAAAACACAACTTGATCCTAGAGAATTAGTCAATTACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480308 True 302 lncRNA 0.33 1 644260 644561

Neighbor

gene id symbol gene type direction distance location
CI01000304_00480135_00531529 NA coding upstream 112223 479781 ~ 532037 (+)
CI01000304_00453663_00453991 CTXN3 coding upstream 189020 453663 ~ 455240 (+)
CI01000304_00424703_00434890 PRRC1 coding upstream 209194 424703 ~ 435066 (+)
CI01000304_00370333_00419672 MEGF10 coding upstream 223505 370333 ~ 420755 (+)
CI01000304_00315935_00342330 LMNB1 coding upstream 301737 314742 ~ 342531 (+)
CI01000304_00695426_00725459 SLC27A6 coding downstream 49900 694461 ~ 725459 (+)
CI01000304_00728178_00731945 ISOC1, ISOC1.L coding downstream 83395 727956 ~ 732274 (+)
CI01000304_00757894_00760456 NA coding downstream 113333 757894 ~ 760660 (+)
CI01000304_00772995_00827316 CHSY3 coding downstream 126472 771033 ~ 827608 (+)
CI01000304_00846138_00850133 NA coding downstream 201498 846059 ~ 850379 (+)
G418138 NA non-coding upstream 6802 637237 ~ 637458 (+)
G418134 NA non-coding upstream 11595 632332 ~ 632665 (+)
G418132 NA non-coding upstream 15734 628321 ~ 628526 (+)
G418093 NA non-coding upstream 18662 625398 ~ 625598 (+)
G418090 NA non-coding upstream 20070 619225 ~ 624190 (+)
G418145 NA non-coding downstream 9091 653652 ~ 653903 (+)
G418148 NA non-coding downstream 19699 664260 ~ 664617 (+)
G418149 NA non-coding downstream 22056 666617 ~ 667483 (+)
G418156 NA non-coding downstream 48789 693350 ~ 693603 (+)
G418180 NA non-coding downstream 281944 926505 ~ 926772 (+)
G418059 NA other upstream 79809 558092 ~ 564451 (+)
G417987 NA other upstream 416407 226703 ~ 227853 (+)
G418116 NA other downstream 228109 872670 ~ 875249 (+)
G418981 NA other downstream 1447933 2092494 ~ 2093678 (+)
G420445 NA other downstream 3658775 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4528662 5173426 ~ 5176791 (+)
G421162 NA other downstream 5596672 6241233 ~ 6242997 (+)

Expression


Co-expression Network