G418477



Basic Information


Item Value
gene id G418477
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 646306 ~ 646610 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU480673
GGTGTTAAAATGGAGAAAAAAACCTTGGGAGAAACCAGGCTTAGTCGGGGGGCCAGTTCTCCTCTGGCCAACAGTGCTTTGTTACAATTCAGGTTGCTATCATAAGTCCAATAGGATCGCAACATTAAAAGTATTTATTCCAGTTCCATCCAATTGAGGATCGTATTGAGGATCACGCCGGTATGGACGGTTGTTGAGGAACTGTGTCGTGGCTGTCGTGTCGATGAGGCCCTCACAGTGGATGATCTAGTTGACTCAATCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU480673 True 262 lncRNA 0.46 2 646306 646610

Neighbor


gene id symbol gene type direction distance location
CI01000304_00348539_00351333 NA coding downstream 294973 347671 ~ 351333 (-)
CI01000304_00167148_00268194 ALDH7A1 coding downstream 378112 167148 ~ 268194 (-)
CI01000304_00140443_00163606 NA coding downstream 482623 139690 ~ 163683 (-)
CI01000304_00088915_00116828 NA coding downstream 529478 88164 ~ 116828 (-)
CI01000304_00670372_00671143 NA coding upstream 22666 669276 ~ 671143 (-)
CI01000304_00682765_00692613 NA coding upstream 35899 682509 ~ 692656 (-)
CI01000304_00748608_00750261 NA coding upstream 101705 748315 ~ 751532 (-)
CI01000304_00843412_00844705 HINT1 coding upstream 196685 843295 ~ 844705 (-)
CI01000304_00852998_00861119 PPP2CA, PPP2CB, CDKL3 coding upstream 206336 852946 ~ 861367 (-)
G418471 NA non-coding downstream 7994 638075 ~ 638312 (-)
G418467 NA non-coding downstream 11895 634192 ~ 634411 (-)
G418464 NA non-coding downstream 18031 627895 ~ 628275 (-)
G418456 NA non-coding downstream 32993 613086 ~ 613313 (-)
G418454 NA non-coding downstream 35132 610899 ~ 611174 (-)
G418479 NA non-coding upstream 1798 648408 ~ 648684 (-)
G418489 NA non-coding upstream 17442 664052 ~ 664337 (-)
G418492 NA non-coding upstream 21962 668572 ~ 668867 (-)
G418494 NA non-coding upstream 28932 675542 ~ 675887 (-)
G418424 NA non-coding upstream 49047 695657 ~ 697197 (-)
G419353 NA other upstream 1582774 2229384 ~ 2236106 (-)
G419354 NA other upstream 1615892 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 3617135 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 4015206 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 5830841 6480743 ~ 6483986 (-)

Expression



Co-expression Network