Gene
RNA
| Item | Value |
|---|---|
| gene id | G418494 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 675542 ~ 675887 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480691 | True | 346 | lncRNA | 0.36 | 1 | 675542 | 675887 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_00670372_00671143 | NA | coding | downstream | 4399 | 669276 ~ 671143 (-) |
| CI01000304_00348539_00351333 | NA | coding | downstream | 324209 | 347671 ~ 351333 (-) |
| CI01000304_00167148_00268194 | ALDH7A1 | coding | downstream | 407348 | 167148 ~ 268194 (-) |
| CI01000304_00140443_00163606 | NA | coding | downstream | 511859 | 139690 ~ 163683 (-) |
| CI01000304_00088915_00116828 | NA | coding | downstream | 558714 | 88164 ~ 116828 (-) |
| CI01000304_00682765_00692613 | NA | coding | upstream | 6622 | 682509 ~ 692656 (-) |
| CI01000304_00748608_00750261 | NA | coding | upstream | 72428 | 748315 ~ 751532 (-) |
| CI01000304_00843412_00844705 | HINT1 | coding | upstream | 167408 | 843295 ~ 844705 (-) |
| CI01000304_00852998_00861119 | PPP2CA, PPP2CB, CDKL3 | coding | upstream | 177059 | 852946 ~ 861367 (-) |
| CI01000304_00862451_00870277 | NA | coding | upstream | 186266 | 862153 ~ 872429 (-) |
| G418492 | NA | non-coding | downstream | 6675 | 668572 ~ 668867 (-) |
| G418489 | NA | non-coding | downstream | 11205 | 664052 ~ 664337 (-) |
| G418479 | NA | non-coding | downstream | 26858 | 648408 ~ 648684 (-) |
| G418477 | NA | non-coding | downstream | 28932 | 646306 ~ 646610 (-) |
| G418471 | NA | non-coding | downstream | 37230 | 638075 ~ 638312 (-) |
| G418424 | NA | non-coding | upstream | 19770 | 695657 ~ 697197 (-) |
| G418423 | NA | non-coding | upstream | 51122 | 727009 ~ 727304 (-) |
| G418499 | NA | non-coding | upstream | 60982 | 736869 ~ 737072 (-) |
| G418556 | NA | non-coding | upstream | 152627 | 828514 ~ 828843 (-) |
| G418558 | NA | non-coding | upstream | 158059 | 833946 ~ 834162 (-) |
| G419353 | NA | other | upstream | 1553497 | 2229384 ~ 2236106 (-) |
| G419354 | NA | other | upstream | 1586615 | 2262502 ~ 2266241 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 3587858 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 3985929 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 5801564 | 6480743 ~ 6483986 (-) |
