G418556



Basic Information


Item Value
gene id G418556
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 828514 ~ 828843 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU480766
GGCTCCTGAAGGGGATCAGCTCCAGAATACTGGTCTCTCAACCTCAACTCTAGAGCTCCCTCCACAAGGAAACTATATACCTAAAGTGGAGAGTCTTCACTTTATGGTGCAGAGAACGTCAGCTGGACCCAGTAAACTGCCCGGTGGCTTCAGTGCTGGAGTTCCATCAAGACCGCTTCCCCATCCCCATCCACACTTAAGGTTTAAGTGGAAACCATTCCTGCCTCCCAAGCACCACTGAGCGAGGGATCCTGGGGAGACAAAATGGCTTGGTGATTGTTTTCACCTTTTTAACCAAACTGAGTTCTCTCCAGTCTAAAATAATGTGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU480766 True 330 lncRNA 0.49 1 828514 828843

Neighbor


gene id symbol gene type direction distance location
CI01000304_00748608_00750261 NA coding downstream 76982 748315 ~ 751532 (-)
CI01000304_00682765_00692613 NA coding downstream 135858 682509 ~ 692656 (-)
CI01000304_00670372_00671143 NA coding downstream 157371 669276 ~ 671143 (-)
CI01000304_00348539_00351333 NA coding downstream 477181 347671 ~ 351333 (-)
CI01000304_00167148_00268194 ALDH7A1 coding downstream 560320 167148 ~ 268194 (-)
CI01000304_00843412_00844705 HINT1 coding upstream 14452 843295 ~ 844705 (-)
CI01000304_00852998_00861119 PPP2CA, PPP2CB, CDKL3 coding upstream 24103 852946 ~ 861367 (-)
CI01000304_00862451_00870277 NA coding upstream 33310 862153 ~ 872429 (-)
CI01000304_00877256_00878179 PURG coding upstream 47291 876134 ~ 878179 (-)
CI01000304_01030191_01033191 FUT10 coding upstream 200329 1029172 ~ 1033191 (-)
G418499 NA non-coding downstream 91442 736869 ~ 737072 (-)
G418423 NA non-coding downstream 101210 727009 ~ 727304 (-)
G418424 NA non-coding downstream 131317 695657 ~ 697197 (-)
G418494 NA non-coding downstream 152627 675542 ~ 675887 (-)
G418492 NA non-coding downstream 159647 668572 ~ 668867 (-)
G418558 NA non-coding upstream 5103 833946 ~ 834162 (-)
G418563 NA non-coding upstream 10013 838856 ~ 839357 (-)
G418530 NA non-coding upstream 43829 872672 ~ 875306 (-)
G418567 NA non-coding upstream 56963 885806 ~ 889909 (-)
G418573 NA non-coding upstream 73999 902842 ~ 905854 (-)
G419353 NA other upstream 1400541 2229384 ~ 2236106 (-)
G419354 NA other upstream 1433659 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 3434902 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 3832973 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 5648608 6480743 ~ 6483986 (-)

Expression



Co-expression Network