G418558



Basic Information


Item Value
gene id G418558
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 833946 ~ 834162 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU480768
GCTGTCTTTATTCACACAGATTCACTCTTACACTGTAATATTTTAAATTCTGAAATGATATTCTGTAATGATCTTTTCTGGTAAAGTCTGCATTTTATGCACACTGAGCAGGTTTTAATCAATTTCTTCACTTTAGCAGCAGCATATTATGAGAGCAGATGAGCATGTCATTTCATTTGTTTTCCATTCATTCAGATAATACAGCAGTCAGTCATTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU480768 True 217 lncRNA 0.33 1 833946 834162

Neighbor


gene id symbol gene type direction distance location
CI01000304_00748608_00750261 NA coding downstream 82414 748315 ~ 751532 (-)
CI01000304_00682765_00692613 NA coding downstream 141290 682509 ~ 692656 (-)
CI01000304_00670372_00671143 NA coding downstream 162803 669276 ~ 671143 (-)
CI01000304_00348539_00351333 NA coding downstream 482613 347671 ~ 351333 (-)
CI01000304_00167148_00268194 ALDH7A1 coding downstream 565752 167148 ~ 268194 (-)
CI01000304_00843412_00844705 HINT1 coding upstream 9133 843295 ~ 844705 (-)
CI01000304_00852998_00861119 PPP2CA, PPP2CB, CDKL3 coding upstream 18784 852946 ~ 861367 (-)
CI01000304_00862451_00870277 NA coding upstream 27991 862153 ~ 872429 (-)
CI01000304_00877256_00878179 PURG coding upstream 41972 876134 ~ 878179 (-)
CI01000304_01030191_01033191 FUT10 coding upstream 195010 1029172 ~ 1033191 (-)
G418556 NA non-coding downstream 5103 828514 ~ 828843 (-)
G418499 NA non-coding downstream 96874 736869 ~ 737072 (-)
G418423 NA non-coding downstream 106642 727009 ~ 727304 (-)
G418424 NA non-coding downstream 136749 695657 ~ 697197 (-)
G418494 NA non-coding downstream 158059 675542 ~ 675887 (-)
G418563 NA non-coding upstream 4694 838856 ~ 839357 (-)
G418530 NA non-coding upstream 38510 872672 ~ 875306 (-)
G418567 NA non-coding upstream 51644 885806 ~ 889909 (-)
G418573 NA non-coding upstream 68680 902842 ~ 905854 (-)
G418576 NA non-coding upstream 75478 909640 ~ 916578 (-)
G419353 NA other upstream 1395222 2229384 ~ 2236106 (-)
G419354 NA other upstream 1428340 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 3429583 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 3827654 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 5643289 6480743 ~ 6483986 (-)

Expression



Co-expression Network