Gene
RNA
| Item | Value |
|---|---|
| gene id | G418567 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 885806 ~ 889909 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480778 | True | 286 | lncRNA | 0.47 | 2 | 885806 | 889909 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_00877256_00878179 | PURG | coding | downstream | 7627 | 876134 ~ 878179 (-) |
| CI01000304_00862451_00870277 | NA | coding | downstream | 13377 | 862153 ~ 872429 (-) |
| CI01000304_00852998_00861119 | PPP2CA, PPP2CB, CDKL3 | coding | downstream | 24439 | 852946 ~ 861367 (-) |
| CI01000304_00843412_00844705 | HINT1 | coding | downstream | 41101 | 843295 ~ 844705 (-) |
| CI01000304_00748608_00750261 | NA | coding | downstream | 134274 | 748315 ~ 751532 (-) |
| CI01000304_01030191_01033191 | FUT10 | coding | upstream | 139263 | 1029172 ~ 1033191 (-) |
| CI01000304_01054942_01133130 | NA | coding | upstream | 165033 | 1054942 ~ 1133130 (-) |
| CI01000304_01186035_01200177 | SLC38A9 | coding | upstream | 295952 | 1185861 ~ 1200808 (-) |
| CI01000304_01216763_01232729 | DDX4, VAS | coding | upstream | 326807 | 1216716 ~ 1232729 (-) |
| CI01000304_01365055_01365447 | NA | coding | upstream | 474892 | 1364801 ~ 1365559 (-) |
| G418530 | NA | non-coding | downstream | 10500 | 872672 ~ 875306 (-) |
| G418563 | NA | non-coding | downstream | 46449 | 838856 ~ 839357 (-) |
| G418558 | NA | non-coding | downstream | 51644 | 833946 ~ 834162 (-) |
| G418556 | NA | non-coding | downstream | 56963 | 828514 ~ 828843 (-) |
| G418499 | NA | non-coding | downstream | 148734 | 736869 ~ 737072 (-) |
| G418573 | NA | non-coding | upstream | 12933 | 902842 ~ 905854 (-) |
| G418576 | NA | non-coding | upstream | 19731 | 909640 ~ 916578 (-) |
| G418584 | NA | non-coding | upstream | 36595 | 926504 ~ 926783 (-) |
| G418598 | NA | non-coding | upstream | 44226 | 934135 ~ 934364 (-) |
| G418601 | NA | non-coding | upstream | 60971 | 950880 ~ 951122 (-) |
| G419353 | NA | other | upstream | 1339475 | 2229384 ~ 2236106 (-) |
| G419354 | NA | other | upstream | 1372593 | 2262502 ~ 2266241 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 3373836 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 3771907 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 5587542 | 6480743 ~ 6483986 (-) |
