Gene
RNA
| Item | Value |
|---|---|
| gene id | G418598 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 934135 ~ 934364 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480831 | True | 230 | lncRNA | 0.36 | 1 | 934135 | 934364 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_00877256_00878179 | PURG | coding | downstream | 55956 | 876134 ~ 878179 (-) |
| CI01000304_00862451_00870277 | NA | coding | downstream | 61706 | 862153 ~ 872429 (-) |
| CI01000304_00852998_00861119 | PPP2CA, PPP2CB, CDKL3 | coding | downstream | 72768 | 852946 ~ 861367 (-) |
| CI01000304_00843412_00844705 | HINT1 | coding | downstream | 89430 | 843295 ~ 844705 (-) |
| CI01000304_00748608_00750261 | NA | coding | downstream | 182603 | 748315 ~ 751532 (-) |
| CI01000304_01030191_01033191 | FUT10 | coding | upstream | 94808 | 1029172 ~ 1033191 (-) |
| CI01000304_01054942_01133130 | NA | coding | upstream | 120578 | 1054942 ~ 1133130 (-) |
| CI01000304_01186035_01200177 | SLC38A9 | coding | upstream | 251497 | 1185861 ~ 1200808 (-) |
| CI01000304_01216763_01232729 | DDX4, VAS | coding | upstream | 282352 | 1216716 ~ 1232729 (-) |
| CI01000304_01365055_01365447 | NA | coding | upstream | 430437 | 1364801 ~ 1365559 (-) |
| G418584 | NA | non-coding | downstream | 7352 | 926504 ~ 926783 (-) |
| G418576 | NA | non-coding | downstream | 17557 | 909640 ~ 916578 (-) |
| G418573 | NA | non-coding | downstream | 28281 | 902842 ~ 905854 (-) |
| G418567 | NA | non-coding | downstream | 44226 | 885806 ~ 889909 (-) |
| G418530 | NA | non-coding | downstream | 58829 | 872672 ~ 875306 (-) |
| G418601 | NA | non-coding | upstream | 16516 | 950880 ~ 951122 (-) |
| G418590 | NA | non-coding | upstream | 29375 | 963739 ~ 1020047 (-) |
| G418592 | NA | non-coding | upstream | 32062 | 966426 ~ 968577 (-) |
| G418616 | NA | non-coding | upstream | 47898 | 982262 ~ 983636 (-) |
| G418628 | NA | non-coding | upstream | 66916 | 1001280 ~ 1001682 (-) |
| G419353 | NA | other | upstream | 1295020 | 2229384 ~ 2236106 (-) |
| G419354 | NA | other | upstream | 1328138 | 2262502 ~ 2266241 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 3329381 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 3727452 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 5543087 | 6480743 ~ 6483986 (-) |
