G418601



Basic Information


Item Value
gene id G418601
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 950880 ~ 951122 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU480834
NNNNNAAGAGTTTCACAGGACGCATCCGGAGAGACCGGCCCCTCGACCACGTGGTAGACCCCGGCGTCGTCCGCCTCCTCGCGTCTGGAGCCGCTCGCAGGGGGGGTGCTCTGTCACAAGTGAGGCTCCCGCACTTCCTCCCCCGCACCACCGGAGGGAGCCTTCACCGGAATACTGAGACTATCATTCAGACTACATTTCCCATAGGCCCTCATTCCTGGGACTGATTGCGCACACACCTGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU480834 True 243 lncRNA 0.61 1 950880 951122

Neighbor


gene id symbol gene type direction distance location
CI01000304_00877256_00878179 PURG coding downstream 72701 876134 ~ 878179 (-)
CI01000304_00862451_00870277 NA coding downstream 78451 862153 ~ 872429 (-)
CI01000304_00852998_00861119 PPP2CA, PPP2CB, CDKL3 coding downstream 89513 852946 ~ 861367 (-)
CI01000304_00843412_00844705 HINT1 coding downstream 106175 843295 ~ 844705 (-)
CI01000304_00748608_00750261 NA coding downstream 199348 748315 ~ 751532 (-)
CI01000304_01030191_01033191 FUT10 coding upstream 78050 1029172 ~ 1033191 (-)
CI01000304_01054942_01133130 NA coding upstream 103820 1054942 ~ 1133130 (-)
CI01000304_01186035_01200177 SLC38A9 coding upstream 234739 1185861 ~ 1200808 (-)
CI01000304_01216763_01232729 DDX4, VAS coding upstream 265594 1216716 ~ 1232729 (-)
CI01000304_01365055_01365447 NA coding upstream 413679 1364801 ~ 1365559 (-)
G418598 NA non-coding downstream 16516 934135 ~ 934364 (-)
G418584 NA non-coding downstream 24097 926504 ~ 926783 (-)
G418576 NA non-coding downstream 34302 909640 ~ 916578 (-)
G418573 NA non-coding downstream 45026 902842 ~ 905854 (-)
G418567 NA non-coding downstream 60971 885806 ~ 889909 (-)
G418590 NA non-coding upstream 12617 963739 ~ 1020047 (-)
G418592 NA non-coding upstream 15304 966426 ~ 968577 (-)
G418616 NA non-coding upstream 31140 982262 ~ 983636 (-)
G418628 NA non-coding upstream 50158 1001280 ~ 1001682 (-)
G418629 NA non-coding upstream 69535 1020657 ~ 1020941 (-)
G419353 NA other upstream 1278262 2229384 ~ 2236106 (-)
G419354 NA other upstream 1311380 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 3312623 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 3710694 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 5526329 6480743 ~ 6483986 (-)

Expression



Co-expression Network