Gene
RNA
| Item | Value |
|---|---|
| gene id | G418628 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 1001280 ~ 1001682 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480861 | True | 328 | lncRNA | 0.39 | 2 | 1001280 | 1001682 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_00877256_00878179 | PURG | coding | downstream | 123101 | 876134 ~ 878179 (-) |
| CI01000304_00862451_00870277 | NA | coding | downstream | 128851 | 862153 ~ 872429 (-) |
| CI01000304_00852998_00861119 | PPP2CA, PPP2CB, CDKL3 | coding | downstream | 139913 | 852946 ~ 861367 (-) |
| CI01000304_00843412_00844705 | HINT1 | coding | downstream | 156575 | 843295 ~ 844705 (-) |
| CI01000304_00748608_00750261 | NA | coding | downstream | 249748 | 748315 ~ 751532 (-) |
| CI01000304_01030191_01033191 | FUT10 | coding | upstream | 27490 | 1029172 ~ 1033191 (-) |
| CI01000304_01054942_01133130 | NA | coding | upstream | 53260 | 1054942 ~ 1133130 (-) |
| CI01000304_01186035_01200177 | SLC38A9 | coding | upstream | 184179 | 1185861 ~ 1200808 (-) |
| CI01000304_01216763_01232729 | DDX4, VAS | coding | upstream | 215034 | 1216716 ~ 1232729 (-) |
| CI01000304_01365055_01365447 | NA | coding | upstream | 363119 | 1364801 ~ 1365559 (-) |
| G418616 | NA | non-coding | downstream | 17644 | 982262 ~ 983636 (-) |
| G418592 | NA | non-coding | downstream | 32703 | 966426 ~ 968577 (-) |
| G418601 | NA | non-coding | downstream | 50158 | 950880 ~ 951122 (-) |
| G418598 | NA | non-coding | downstream | 66916 | 934135 ~ 934364 (-) |
| G418584 | NA | non-coding | downstream | 74497 | 926504 ~ 926783 (-) |
| G418629 | NA | non-coding | upstream | 18975 | 1020657 ~ 1020941 (-) |
| G418593 | NA | non-coding | upstream | 170516 | 1172198 ~ 1172813 (-) |
| G418595 | NA | non-coding | upstream | 171499 | 1173181 ~ 1175223 (-) |
| G418647 | NA | non-coding | upstream | 174085 | 1175767 ~ 1176008 (-) |
| G418594 | NA | non-coding | upstream | 176099 | 1177781 ~ 1178694 (-) |
| G419353 | NA | other | upstream | 1227702 | 2229384 ~ 2236106 (-) |
| G419354 | NA | other | upstream | 1260820 | 2262502 ~ 2266241 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 3262063 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 3660134 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 5475769 | 6480743 ~ 6483986 (-) |
