G418196


Basic Information

Item Value
gene id G418196
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1048258 ~ 1048495 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480370
GCTTCTGAAAAGACGCAAGCGCAACGGTGAAACATGTCCATCTAGTGCGTTTACATAGAAAAACAATGGAAAAGTAGCGCACTGGAATGGAAAAACATATTCTGTGTGAACGACCGACCCCTAAGTTTGTAACATTCCACCCTCTTCTCCTTTTTGGTTGAGAATGAAGTCTCTGTAGATCTGCTCACATTAAGCTGAACTCTCTATAACGTGGTCAGCTGGACATGCTCTCTTGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480370 True 238 lncRNA 0.43 1 1048258 1048495

Neighbor

gene id symbol gene type direction distance location
CI01000304_00983004_01018406 NRG1 coding upstream 29565 982912 ~ 1018693 (+)
CI01000304_00962923_00975418 NA coding upstream 72614 962753 ~ 975644 (+)
CI01000304_00933179_00942864 NA coding upstream 104393 931798 ~ 943865 (+)
CI01000304_00884782_00917034 WRN coding upstream 131224 884490 ~ 917034 (+)
CI01000304_00846138_00850133 NA coding upstream 197879 846059 ~ 850379 (+)
CI01000304_01173248_01184405 SH2D4A coding downstream 123642 1172137 ~ 1184529 (+)
CI01000304_01269500_01313976 PPIP5K2 coding downstream 219528 1268023 ~ 1314632 (+)
CI01000304_01323957_01324596 C16H5ORF30, CUNH5ORF30 coding downstream 275462 1323957 ~ 1326322 (+)
CI01000304_01337171_01361506 CHD1 coding downstream 288676 1337171 ~ 1361506 (+)
CI01000304_01366207_01367994 DCP2 coding downstream 317625 1366120 ~ 1368002 (+)
G418195 NA non-coding upstream 659 1047398 ~ 1047599 (+)
G418192 NA non-coding upstream 2847 1044916 ~ 1045411 (+)
G418180 NA non-coding upstream 121486 926505 ~ 926772 (+)
G418156 NA non-coding upstream 354655 693350 ~ 693603 (+)
G418149 NA non-coding upstream 380775 666617 ~ 667483 (+)
G418197 NA non-coding downstream 1124 1049619 ~ 1049865 (+)
G418198 NA non-coding downstream 2571 1051066 ~ 1051348 (+)
G418108 NA non-coding downstream 15532 1064027 ~ 1076725 (+)
G418248 NA non-coding downstream 104680 1153175 ~ 1153572 (+)
G418253 NA non-coding downstream 113527 1162022 ~ 1163131 (+)
G418116 NA other upstream 173009 872670 ~ 875249 (+)
G418059 NA other upstream 483807 558092 ~ 564451 (+)
G417987 NA other upstream 820405 226703 ~ 227853 (+)
G418981 NA other downstream 1043999 2092494 ~ 2093678 (+)
G420445 NA other downstream 3254841 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4124728 5173426 ~ 5176791 (+)
G421162 NA other downstream 5192738 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 6304154 7352621 ~ 7354396 (+)

Expression


Co-expression Network