G418248


Basic Information

Item Value
gene id G418248
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1153175 ~ 1153572 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480425
CTCACCCTCAAGCCATCCTAGGTGTATATGACTTTCTTCTTTCTGACAAAGACAATCTGAGAAATATTAATAAATATCCTGATACATCCGAGCTTTATAATGGCAGTATGCGTTACCAAATGAGTATGAGCTGAAGAAAGTGTCTCCATCCACATCTATCCATCATAAACATATTCCACATGGCTCCAGAGGGGTAATAAAGGCCTTCTGAAGCGAAGCGATGTGTTTGTGTAAAAAAAATATATATATTTAACAAGTTATGAAGTAAAATATGTAGCTTCCGCCAGACCGCCTTCTGTATTCAAATTACGAAAAAAATGGAACTGGCGTTGCGTCAGTTGAATAGGGAAGGCGGGATATTTATTAATATTTCTCAGATTTTCTTTGTCAGAAACAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480425 True 398 lncRNA 0.37 1 1153175 1153572

Neighbor

gene id symbol gene type direction distance location
CI01000304_00983004_01018406 NRG1 coding upstream 134482 982912 ~ 1018693 (+)
CI01000304_00962923_00975418 NA coding upstream 177531 962753 ~ 975644 (+)
CI01000304_00933179_00942864 NA coding upstream 209310 931798 ~ 943865 (+)
CI01000304_00884782_00917034 WRN coding upstream 236141 884490 ~ 917034 (+)
CI01000304_00846138_00850133 NA coding upstream 302796 846059 ~ 850379 (+)
CI01000304_01173248_01184405 SH2D4A coding downstream 18565 1172137 ~ 1184529 (+)
CI01000304_01269500_01313976 PPIP5K2 coding downstream 114451 1268023 ~ 1314632 (+)
CI01000304_01323957_01324596 C16H5ORF30, CUNH5ORF30 coding downstream 170385 1323957 ~ 1326322 (+)
CI01000304_01337171_01361506 CHD1 coding downstream 183599 1337171 ~ 1361506 (+)
CI01000304_01366207_01367994 DCP2 coding downstream 212548 1366120 ~ 1368002 (+)
G418108 NA non-coding upstream 76450 1064027 ~ 1076725 (+)
G418198 NA non-coding upstream 101827 1051066 ~ 1051348 (+)
G418197 NA non-coding upstream 103310 1049619 ~ 1049865 (+)
G418196 NA non-coding upstream 104680 1048258 ~ 1048495 (+)
G418195 NA non-coding upstream 105576 1047398 ~ 1047599 (+)
G418253 NA non-coding downstream 8450 1162022 ~ 1163131 (+)
G418256 NA non-coding downstream 12372 1165944 ~ 1166193 (+)
G418257 NA non-coding downstream 12723 1166295 ~ 1166598 (+)
G418261 NA non-coding downstream 26242 1179814 ~ 1180017 (+)
G418113 NA non-coding downstream 52019 1205591 ~ 1206410 (+)
G418116 NA other upstream 277926 872670 ~ 875249 (+)
G418059 NA other upstream 588724 558092 ~ 564451 (+)
G417987 NA other upstream 925322 226703 ~ 227853 (+)
G418981 NA other downstream 938922 2092494 ~ 2093678 (+)
G420445 NA other downstream 3149764 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4019651 5173426 ~ 5176791 (+)
G421162 NA other downstream 5087661 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 6199077 7352621 ~ 7354396 (+)

Expression


Co-expression Network