Gene
RNA
| Item | Value |
|---|---|
| gene id | G418595 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 1173181 ~ 1175223 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480828 | True | 988 | lncRNA | 0.35 | 2 | 1173181 | 1175223 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_01054942_01133130 | NA | coding | downstream | 40051 | 1054942 ~ 1133130 (-) |
| CI01000304_01030191_01033191 | FUT10 | coding | downstream | 139990 | 1029172 ~ 1033191 (-) |
| CI01000304_00877256_00878179 | PURG | coding | downstream | 295002 | 876134 ~ 878179 (-) |
| CI01000304_00862451_00870277 | NA | coding | downstream | 300752 | 862153 ~ 872429 (-) |
| CI01000304_00852998_00861119 | PPP2CA, PPP2CB, CDKL3 | coding | downstream | 311814 | 852946 ~ 861367 (-) |
| CI01000304_01186035_01200177 | SLC38A9 | coding | upstream | 10638 | 1185861 ~ 1200808 (-) |
| CI01000304_01216763_01232729 | DDX4, VAS | coding | upstream | 41493 | 1216716 ~ 1232729 (-) |
| CI01000304_01365055_01365447 | NA | coding | upstream | 189578 | 1364801 ~ 1365559 (-) |
| CI01000304_01403041_01410830 | APH1A | coding | upstream | 227669 | 1402892 ~ 1410830 (-) |
| CI01000304_01416856_01418996 | NA | coding | upstream | 241426 | 1416649 ~ 1419347 (-) |
| G418593 | NA | non-coding | downstream | 368 | 1172198 ~ 1172813 (-) |
| G418629 | NA | non-coding | downstream | 152240 | 1020657 ~ 1020941 (-) |
| G418590 | NA | non-coding | downstream | 153134 | 963739 ~ 1020047 (-) |
| G418647 | NA | non-coding | upstream | 544 | 1175767 ~ 1176008 (-) |
| G418594 | NA | non-coding | upstream | 2558 | 1177781 ~ 1178694 (-) |
| G418589 | NA | non-coding | upstream | 7652 | 1182875 ~ 1184560 (-) |
| G418652 | NA | non-coding | upstream | 36407 | 1211630 ~ 1211873 (-) |
| G419213 | NA | non-coding | upstream | 81457 | 1256680 ~ 1256965 (-) |
| G419353 | NA | other | upstream | 1054161 | 2229384 ~ 2236106 (-) |
| G419354 | NA | other | upstream | 1087279 | 2262502 ~ 2266241 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 3088522 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 3486593 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 5302228 | 6480743 ~ 6483986 (-) |
