Gene
RNA
| Item | Value |
|---|---|
| gene id | G418652 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 1211630 ~ 1211873 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU480885 | True | 244 | lncRNA | 0.48 | 1 | 1211630 | 1211873 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_01186035_01200177 | SLC38A9 | coding | downstream | 10822 | 1185861 ~ 1200808 (-) |
| CI01000304_01054942_01133130 | NA | coding | downstream | 78500 | 1054942 ~ 1133130 (-) |
| CI01000304_01030191_01033191 | FUT10 | coding | downstream | 178439 | 1029172 ~ 1033191 (-) |
| CI01000304_00877256_00878179 | PURG | coding | downstream | 333451 | 876134 ~ 878179 (-) |
| CI01000304_00862451_00870277 | NA | coding | downstream | 339201 | 862153 ~ 872429 (-) |
| CI01000304_01216763_01232729 | DDX4, VAS | coding | upstream | 4843 | 1216716 ~ 1232729 (-) |
| CI01000304_01365055_01365447 | NA | coding | upstream | 152928 | 1364801 ~ 1365559 (-) |
| CI01000304_01403041_01410830 | APH1A | coding | upstream | 191019 | 1402892 ~ 1410830 (-) |
| CI01000304_01416856_01418996 | NA | coding | upstream | 204776 | 1416649 ~ 1419347 (-) |
| CI01000304_01422089_01435801 | TPM2 | coding | upstream | 210216 | 1422089 ~ 1435801 (-) |
| G418589 | NA | non-coding | downstream | 27070 | 1182875 ~ 1184560 (-) |
| G418594 | NA | non-coding | downstream | 32936 | 1177781 ~ 1178694 (-) |
| G418647 | NA | non-coding | downstream | 35622 | 1175767 ~ 1176008 (-) |
| G418595 | NA | non-coding | downstream | 36407 | 1173181 ~ 1175223 (-) |
| G418593 | NA | non-coding | downstream | 38817 | 1172198 ~ 1172813 (-) |
| G419213 | NA | non-coding | upstream | 44807 | 1256680 ~ 1256965 (-) |
| G419238 | NA | non-coding | upstream | 103512 | 1315385 ~ 1315588 (-) |
| G419239 | NA | non-coding | upstream | 105403 | 1317276 ~ 1317517 (-) |
| G419246 | NA | non-coding | upstream | 112098 | 1323971 ~ 1328397 (-) |
| G419353 | NA | other | upstream | 1017511 | 2229384 ~ 2236106 (-) |
| G419354 | NA | other | upstream | 1050629 | 2262502 ~ 2266241 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 3051872 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 3449943 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 5265578 | 6480743 ~ 6483986 (-) |
