Gene
RNA
| Item | Value |
|---|---|
| gene id | G419238 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 1315385 ~ 1315588 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU481556 | True | 204 | lncRNA | 0.34 | 1 | 1315385 | 1315588 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_01216763_01232729 | DDX4, VAS | coding | downstream | 82656 | 1216716 ~ 1232729 (-) |
| CI01000304_01186035_01200177 | SLC38A9 | coding | downstream | 114577 | 1185861 ~ 1200808 (-) |
| CI01000304_01054942_01133130 | NA | coding | downstream | 182255 | 1054942 ~ 1133130 (-) |
| CI01000304_01030191_01033191 | FUT10 | coding | downstream | 282194 | 1029172 ~ 1033191 (-) |
| CI01000304_00877256_00878179 | PURG | coding | downstream | 437206 | 876134 ~ 878179 (-) |
| CI01000304_01365055_01365447 | NA | coding | upstream | 49213 | 1364801 ~ 1365559 (-) |
| CI01000304_01403041_01410830 | APH1A | coding | upstream | 87304 | 1402892 ~ 1410830 (-) |
| CI01000304_01416856_01418996 | NA | coding | upstream | 101061 | 1416649 ~ 1419347 (-) |
| CI01000304_01422089_01435801 | TPM2 | coding | upstream | 106501 | 1422089 ~ 1435801 (-) |
| CI01000304_01439737_01500518 | TLN1 | coding | upstream | 123714 | 1439302 ~ 1500640 (-) |
| G419213 | NA | non-coding | downstream | 58420 | 1256680 ~ 1256965 (-) |
| G418652 | NA | non-coding | downstream | 103512 | 1211630 ~ 1211873 (-) |
| G418589 | NA | non-coding | downstream | 130825 | 1182875 ~ 1184560 (-) |
| G418594 | NA | non-coding | downstream | 136691 | 1177781 ~ 1178694 (-) |
| G418647 | NA | non-coding | downstream | 139377 | 1175767 ~ 1176008 (-) |
| G419239 | NA | non-coding | upstream | 1688 | 1317276 ~ 1317517 (-) |
| G419246 | NA | non-coding | upstream | 8383 | 1323971 ~ 1328397 (-) |
| G419276 | NA | non-coding | upstream | 233828 | 1549416 ~ 1554405 (-) |
| G419285 | NA | non-coding | upstream | 328457 | 1644045 ~ 1644279 (-) |
| G419353 | NA | other | upstream | 913796 | 2229384 ~ 2236106 (-) |
| G419354 | NA | other | upstream | 946914 | 2262502 ~ 2266241 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 2948157 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 3346228 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 5161863 | 6480743 ~ 6483986 (-) |
