G418701


Basic Information

Item Value
gene id G418701
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1382347 ~ 1382859 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480965
CAGGTACCTTGCCCTATGTAATCATATCCTATATTTATTCACTGTGGGGGGTATATCAGAGCTCGAGTTGAAGCTGCTTCATTGAGCCCCTCCTCAGTGGACAGCATGCCAAATTAGCTAACCTAATACCCTAAAGATTATATGGGCAAACAAACTCGTTAATTACTTTAAAAGTTAACTAATCAAGAGCAAAATAAAAAATATGTGTGTGCATGTATATTACATGATATTAATGTTGTATTTTTTGACCATTTTTGTTCTTGAAATCCATCCTTCTGATGGGATCAGTATAATCCAGATATTTTGGATCAAAGGTATCCCAATCTTACTAAAAAGTTTTAAACAACACAAACTGATGATTTTATCCTGATCAAAACCAAGATTGGATTTTGTGATCTAATCTGATTTCAGAATCCTTTTTTCCTTTTGAACAACCCACTTTCAAGATTTGATCCAATCCAATGGCCGAAATCCGATCAGATTACTTTTGAACAACTGGCCCCTGGTGTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480965 True 513 lncRNA 0.35 1 1382347 1382859

Neighbor

gene id symbol gene type direction distance location
CI01000304_01375020_01379551 NA coding upstream 2531 1374871 ~ 1379816 (+)
CI01000304_01369056_01372878 DCP2 coding upstream 9375 1368596 ~ 1372972 (+)
CI01000304_01366207_01367994 DCP2 coding upstream 14345 1366120 ~ 1368002 (+)
CI01000304_01337171_01361506 CHD1 coding upstream 20841 1337171 ~ 1361506 (+)
CI01000304_01323957_01324596 C16H5ORF30, CUNH5ORF30 coding upstream 56025 1323957 ~ 1326322 (+)
CI01000304_01392985_01399147 CA9 coding downstream 10126 1392985 ~ 1399153 (+)
CI01000304_01681164_01706159 ANKRD55 coding downstream 298305 1681164 ~ 1706397 (+)
CI01000304_01718700_01722248 NA coding downstream 335469 1718328 ~ 1722276 (+)
CI01000304_01829156_01835147 ST8SIA4 coding downstream 446297 1829156 ~ 1835165 (+)
CI01000304_01877287_01890608 SYK coding downstream 492531 1875390 ~ 1890746 (+)
G418694 NA non-coding upstream 6053 1375961 ~ 1376294 (+)
G418667 NA non-coding upstream 16788 1365014 ~ 1365559 (+)
G418691 NA non-coding upstream 49750 1332334 ~ 1332597 (+)
G418649 NA non-coding upstream 175371 1206710 ~ 1206976 (+)
G418113 NA non-coding upstream 175937 1205591 ~ 1206410 (+)
G418702 NA non-coding downstream 155 1383014 ~ 1383342 (+)
G418666 NA non-coding downstream 55919 1438778 ~ 1447835 (+)
G418675 NA non-coding downstream 95690 1478549 ~ 1486508 (+)
G418683 NA non-coding downstream 105696 1488555 ~ 1489020 (+)
G418671 NA non-coding downstream 138548 1521407 ~ 1560655 (+)
G418116 NA other upstream 507098 872670 ~ 875249 (+)
G418059 NA other upstream 817896 558092 ~ 564451 (+)
G417987 NA other upstream 1154494 226703 ~ 227853 (+)
G418981 NA other downstream 709635 2092494 ~ 2093678 (+)
G420445 NA other downstream 2920477 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 3790364 5173426 ~ 5176791 (+)
G421162 NA other downstream 4858374 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 5969790 7352621 ~ 7354396 (+)

Expression


Co-expression Network