G418683


Basic Information

Item Value
gene id G418683
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1488555 ~ 1489020 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480947
TGGTAGTTTATCCACCCACTGAAGTTTCAAAGGTGTTATTGTGTATGTGTATATCTGACCAGAGGGGGCATGTGTCCTCTGTGCATCTGCCCACTGGTGATGTGCTGTTTGGCCTGCGGCATGGAGCCCGTCTGGAAGTTCTCTGGACCTCCGGCACCAGAGCGGATGATGGCTGGCAGAGCAACAGAGCCCGTCTCCACCTTCCCAACTTTATTAAACTGCTGCTGGAGTACTGTTGACCTTTTTGGGAGACACCGAATCCTCCAACATGGTTGATTCCTCATCGCCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480947 True 291 lncRNA 0.53 2 1488555 1489020

Neighbor

gene id symbol gene type direction distance location
CI01000304_01392985_01399147 CA9 coding upstream 89402 1392985 ~ 1399153 (+)
CI01000304_01375020_01379551 NA coding upstream 108739 1374871 ~ 1379816 (+)
CI01000304_01369056_01372878 DCP2 coding upstream 115583 1368596 ~ 1372972 (+)
CI01000304_01366207_01367994 DCP2 coding upstream 120553 1366120 ~ 1368002 (+)
CI01000304_01337171_01361506 CHD1 coding upstream 127049 1337171 ~ 1361506 (+)
CI01000304_01681164_01706159 ANKRD55 coding downstream 192144 1681164 ~ 1706397 (+)
CI01000304_01718700_01722248 NA coding downstream 229308 1718328 ~ 1722276 (+)
CI01000304_01829156_01835147 ST8SIA4 coding downstream 340136 1829156 ~ 1835165 (+)
CI01000304_01877287_01890608 SYK coding downstream 386370 1875390 ~ 1890746 (+)
CI01000304_02136252_02167869 SEC31A coding downstream 647232 2136252 ~ 2168463 (+)
G418675 NA non-coding upstream 2047 1478549 ~ 1486508 (+)
G418666 NA non-coding upstream 40720 1438778 ~ 1447835 (+)
G418702 NA non-coding upstream 105213 1383014 ~ 1383342 (+)
G418701 NA non-coding upstream 105696 1382347 ~ 1382859 (+)
G418694 NA non-coding upstream 112261 1375961 ~ 1376294 (+)
G418671 NA non-coding downstream 32387 1521407 ~ 1560655 (+)
G418669 NA non-coding downstream 75885 1564905 ~ 1568257 (+)
G418751 NA non-coding downstream 80216 1569236 ~ 1569435 (+)
G418799 NA non-coding downstream 189771 1678791 ~ 1740632 (+)
G418798 NA non-coding downstream 227507 1716527 ~ 1717649 (+)
G418116 NA other upstream 613306 872670 ~ 875249 (+)
G418059 NA other upstream 924104 558092 ~ 564451 (+)
G417987 NA other upstream 1260702 226703 ~ 227853 (+)
G418981 NA other downstream 603474 2092494 ~ 2093678 (+)
G420445 NA other downstream 2814316 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 3684203 5173426 ~ 5176791 (+)
G421162 NA other downstream 4752213 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 5863629 7352621 ~ 7354396 (+)

Expression


Co-expression Network