Gene
RNA
| Item | Value |
|---|---|
| gene id | G419276 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 1549416 ~ 1554405 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU481595 | True | 404 | lncRNA | 0.51 | 2 | 1549416 | 1554405 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_01439737_01500518 | TLN1 | coding | downstream | 48776 | 1439302 ~ 1500640 (-) |
| CI01000304_01422089_01435801 | TPM2 | coding | downstream | 113615 | 1422089 ~ 1435801 (-) |
| CI01000304_01416856_01418996 | NA | coding | downstream | 130069 | 1416649 ~ 1419347 (-) |
| CI01000304_01403041_01410830 | APH1A | coding | downstream | 138586 | 1402892 ~ 1410830 (-) |
| CI01000304_01365055_01365447 | NA | coding | downstream | 183969 | 1364801 ~ 1365559 (-) |
| CI01000304_01560571_01565345 | HMGCS1 | coding | upstream | 5963 | 1560368 ~ 1568276 (-) |
| CI01000304_01573427_01639447 | MAP3K1 | coding | upstream | 17994 | 1572399 ~ 1639839 (-) |
| CI01000304_01764213_01809758 | PAM | coding | upstream | 209225 | 1763630 ~ 1809758 (-) |
| CI01000304_01839482_01853648 | NA | coding | upstream | 285065 | 1839470 ~ 1853793 (-) |
| CI01000304_01862046_01862663 | DIRAS2.L, DIRAS2 | coding | upstream | 307309 | 1861714 ~ 1862663 (-) |
| G419246 | NA | non-coding | downstream | 221019 | 1323971 ~ 1328397 (-) |
| G419239 | NA | non-coding | downstream | 231899 | 1317276 ~ 1317517 (-) |
| G419238 | NA | non-coding | downstream | 233828 | 1315385 ~ 1315588 (-) |
| G419213 | NA | non-coding | downstream | 292451 | 1256680 ~ 1256965 (-) |
| G419285 | NA | non-coding | upstream | 89640 | 1644045 ~ 1644279 (-) |
| G419296 | NA | non-coding | upstream | 192387 | 1746792 ~ 1748964 (-) |
| G419324 | NA | non-coding | upstream | 205551 | 1759956 ~ 1760297 (-) |
| CI01000304_01897341_01897684 | NA | non-coding | upstream | 322847 | 1894422 ~ 1898210 (-) |
| G419387 | NA | non-coding | upstream | 348236 | 1902641 ~ 1903444 (-) |
| G419353 | NA | other | upstream | 674979 | 2229384 ~ 2236106 (-) |
| G419354 | NA | other | upstream | 708097 | 2262502 ~ 2266241 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 2709340 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 3107411 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 4923046 | 6480743 ~ 6483986 (-) |
