G418798


Basic Information

Item Value
gene id G418798
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1716527 ~ 1717649 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU481067
GGTGAGCCTTTTACCCCGTGTGTGGTAAAAGGCCCCCCTCGCCATCTCATACATTTCTAATAATAATAATAATAATGCATTTTATTTAATGGCACCTTTCATAACACCCAAGGCCACCTCACAAGAAAGCAAAGATAAAAAAAAAAAAAAAAAAAAAAAAAATACAGATCACTACACAAGACAAAACACACAATGAACACTCCGCATATACAGATAAAGTGCAGTAAAGACTCAATAAAACATTATAAATAAGCCTGTATAAAAAGATATGTCTTAAGGCGTGTTTTAAAAGTCAGCAGGCAATCGCTATTGCGAACATCAAGGGGAAGGGAGTTCCTTAGGCGGGGGGCAGCATAGCTAAAAGATCTGGCACCCATGGTAGTTAGTCGAATCCAAGGTACCACAAGAGAAATTGAAGATGAAGATCTGAGAGCACGTGAAGGAGTGTAAACATGAAGAAGTTGAGTAAGGTGTTAGGGTGTAAGATTATGAAGTGCCTTGTAAGTAAGTAGCAAGATCTTGAATTCAATTCGATACTTTACTGGAAGCCAGTGCAATTGCTCAAGAACTGGAGAAATGTGCTCAGTAGAAGGTGTTCTAGAAAGAATATGTGCTGCAGAATTCTGAACCAACTGAAGCTTATGTAGCAATTTAGAGTGAACACCAGTGAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481067 True 674 lncRNA 0.39 2 1716527 1717649

Neighbor

gene id symbol gene type direction distance location
CI01000304_01681164_01706159 ANKRD55 coding upstream 10130 1681164 ~ 1706397 (+)
CI01000304_01392985_01399147 CA9 coding upstream 317374 1392985 ~ 1399153 (+)
CI01000304_01375020_01379551 NA coding upstream 336711 1374871 ~ 1379816 (+)
CI01000304_01369056_01372878 DCP2 coding upstream 343555 1368596 ~ 1372972 (+)
CI01000304_01366207_01367994 DCP2 coding upstream 348525 1366120 ~ 1368002 (+)
CI01000304_01718700_01722248 NA coding downstream 679 1718328 ~ 1722276 (+)
CI01000304_01829156_01835147 ST8SIA4 coding downstream 111507 1829156 ~ 1835165 (+)
CI01000304_01877287_01890608 SYK coding downstream 157741 1875390 ~ 1890746 (+)
CI01000304_02136252_02167869 SEC31A coding downstream 418603 2136252 ~ 2168463 (+)
CI01000304_02206338_02219356 NA coding downstream 488689 2206338 ~ 2219642 (+)
G418751 NA non-coding upstream 147092 1569236 ~ 1569435 (+)
G418669 NA non-coding upstream 148270 1564905 ~ 1568257 (+)
G418671 NA non-coding upstream 155872 1521407 ~ 1560655 (+)
G418683 NA non-coding upstream 227507 1488555 ~ 1489020 (+)
G418675 NA non-coding upstream 230019 1478549 ~ 1486508 (+)
G418790 NA non-coding downstream 52918 1770567 ~ 1809992 (+)
G418860 NA non-coding downstream 140518 1858167 ~ 1858452 (+)
G418861 NA non-coding downstream 142228 1859877 ~ 1860106 (+)
G418865 NA non-coding downstream 181507 1899156 ~ 1900776 (+)
G418872 NA non-coding downstream 191470 1909119 ~ 1909325 (+)
G418116 NA other upstream 841278 872670 ~ 875249 (+)
G418059 NA other upstream 1152076 558092 ~ 564451 (+)
G417987 NA other upstream 1488674 226703 ~ 227853 (+)
G418981 NA other downstream 374845 2092494 ~ 2093678 (+)
G420445 NA other downstream 2585687 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 3455574 5173426 ~ 5176791 (+)
G421162 NA other downstream 4523584 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 5635000 7352621 ~ 7354396 (+)

Expression


Co-expression Network