G418860


Basic Information

Item Value
gene id G418860
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1858167 ~ 1858452 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU481136
AAAGCAATGCATTCTGGTTAGAAAATTTGTCCGACTTTGATCGGCGCTGCAGCCGCCTTACGATCACACGTGCCATCAAAGTACCGCGAGAGCAAAACGAGACCAGCCGCCTAGGTCAGGCACTGCAGTTGCTCAAAATCGGCTGTGAAAGATTTGATGACGACACACTTTATTCTCATTGGTCAGATTCTGTGATGACAAGGACGACGTGTTGGGTGTTTTTTCTTAGACAAGTTCCTGTATTTAACCAATCTTGATATTGAATATCTGATATTCTAAACATGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481136 True 286 lncRNA 0.44 1 1858167 1858452

Neighbor

gene id symbol gene type direction distance location
CI01000304_01829156_01835147 ST8SIA4 coding upstream 23002 1829156 ~ 1835165 (+)
CI01000304_01718700_01722248 NA coding upstream 135891 1718328 ~ 1722276 (+)
CI01000304_01681164_01706159 ANKRD55 coding upstream 151770 1681164 ~ 1706397 (+)
CI01000304_01392985_01399147 CA9 coding upstream 459014 1392985 ~ 1399153 (+)
CI01000304_01375020_01379551 NA coding upstream 478351 1374871 ~ 1379816 (+)
CI01000304_01877287_01890608 SYK coding downstream 16938 1875390 ~ 1890746 (+)
CI01000304_02136252_02167869 SEC31A coding downstream 277800 2136252 ~ 2168463 (+)
CI01000304_02206338_02219356 NA coding downstream 347886 2206338 ~ 2219642 (+)
CI01000304_02229520_02235812 HNRNPDL coding downstream 370687 2229139 ~ 2236204 (+)
CI01000304_02236583_02240921 HNRNPD coding downstream 377915 2236367 ~ 2241608 (+)
G418790 NA non-coding upstream 48175 1770567 ~ 1809992 (+)
G418799 NA non-coding upstream 117535 1678791 ~ 1740632 (+)
G418798 NA non-coding upstream 140518 1716527 ~ 1717649 (+)
G418751 NA non-coding upstream 288732 1569236 ~ 1569435 (+)
G418669 NA non-coding upstream 289910 1564905 ~ 1568257 (+)
G418861 NA non-coding downstream 1425 1859877 ~ 1860106 (+)
G418865 NA non-coding downstream 40704 1899156 ~ 1900776 (+)
G418872 NA non-coding downstream 50667 1909119 ~ 1909325 (+)
G418883 NA non-coding downstream 65462 1923914 ~ 1924175 (+)
G418884 NA non-coding downstream 65967 1924419 ~ 1925229 (+)
G418116 NA other upstream 982918 872670 ~ 875249 (+)
G418059 NA other upstream 1293716 558092 ~ 564451 (+)
G417987 NA other upstream 1630314 226703 ~ 227853 (+)
G418981 NA other downstream 234042 2092494 ~ 2093678 (+)
G420445 NA other downstream 2444884 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 3314771 5173426 ~ 5176791 (+)
G421162 NA other downstream 4382781 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 5494197 7352621 ~ 7354396 (+)

Expression


Co-expression Network