G419387


Basic Information

Item Value
gene id G419387
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1902641 ~ 1903444 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU481749
AAACAACTGGGAAAGGCACGTTAGTAACAGCCATCTTTGTGACTAATGATAGTGGAAAAAATGCTTAATCTTACGTCGCCAATTTGTGGTTTTTGTCAGAAGTTATTAAACAATGAACCACACAAGACAGGAGTCTTTCACTTCTGTTCTCATATGTTACCTCATTACACAACACTTCAACAGTTCAGACTTCCTTTTCAAAATAGTAGTCCAAAATACAATTCACTTATGAACACAACAAGCACATAAGAAATATATAGATCATCCACTGTGAGGGCCTCATCGACACGACAGCCACGACACAGTTCCTCAACAACCGTCCATACCGCCGTGATGAATACAATCTTCAATTGGACGGAACTGGAATAAATACTTTGAATGTTGCGATCCTGTCGGACTTATGATAGCTACCTGAATCGTAACAAAGCACTGTTGGCCAGAGGAGAACTGGCCCCCCGACTAAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCATTTAAACACCTATTTGCCACTTGTCTGCCACCTGATGTCACCTGATGGAGTTTGGGTTCCTTGCCGCTGTCGCCTTTGGCTTGCTTAGTTGGGGACACTTGACATTTGACTTGACATTTGATATTCAACAGTGCTTTGATCTGCCTGCATTGACACTATTCTTTTAAGAGCTGCTGTGCAGCCAAATAATGTACCAGTTATCAATGTAAAGCTGCTTTGACACAATCTACATTGTAAAAAGCGCTATATAAATAAAGGTGACTTGACTTGACTTGACATGAGGGAGATGTTTCAGTACTGCAGACTTATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481749 True 804 lncRNA 0.41 1 1902641 1903444

Neighbor

gene id symbol gene type direction distance location
CI01000304_01897341_01897684 NA coding downstream 4431 1894422 ~ 1898210 (-)
CI01000304_01862046_01862663 DIRAS2.L, DIRAS2 coding downstream 39978 1861714 ~ 1862663 (-)
CI01000304_01839482_01853648 NA coding downstream 48848 1839470 ~ 1853793 (-)
CI01000304_01764213_01809758 PAM coding downstream 92883 1763630 ~ 1809758 (-)
CI01000304_01573427_01639447 MAP3K1 coding downstream 262802 1572399 ~ 1639839 (-)
CI01000304_01937620_01968424 AUH coding upstream 34176 1937620 ~ 1968936 (-)
CI01000304_01970027_01971430 NFIL3 coding upstream 66583 1970027 ~ 1971430 (-)
CI01000304_01975851_01976768 NA coding upstream 72222 1975666 ~ 1977367 (-)
CI01000304_01977963_01994161 ROR2 coding upstream 74414 1977858 ~ 1994161 (-)
CI01000304_02041045_02041482 NA coding upstream 137486 2040930 ~ 2041497 (-)
G419324 NA non-coding downstream 142344 1759956 ~ 1760297 (-)
G419296 NA non-coding downstream 153677 1746792 ~ 1748964 (-)
G419285 NA non-coding downstream 258362 1644045 ~ 1644279 (-)
G419276 NA non-coding downstream 348236 1549416 ~ 1554405 (-)
G419402 NA non-coding upstream 163799 2067243 ~ 2067756 (-)
CI01000304_02131491_02133762 NA non-coding upstream 184680 2131300 ~ 2135561 (-)
G419370 NA non-coding upstream 192134 2095578 ~ 2097618 (-)
G419363 NA non-coding upstream 199013 2102457 ~ 2161900 (-)
G419353 NA other upstream 325940 2229384 ~ 2236106 (-)
G419354 NA other upstream 359058 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 2360301 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 2758372 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 4574007 6480743 ~ 6483986 (-)

Expression


Co-expression Network