G418883


Basic Information

Item Value
gene id G418883
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1923914 ~ 1924175 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU481163
CAGGTGTATAAAATCAAGCACCTAGGCATGCAGACTGCTTCTACAAACGTGTGTGAAAGAATGGGTCGCTTTCAGGGGCTCAGTGAATTCAAGCGTGGTACCGTGATAGGTTGCCACCTGTGCAATAAGTCCATTCGTGAAATTTCCTCACTACTAAATATTCCACGGTCAACTGTTACTGGTATCATAACAAAGTGGAAGCAATTGGGAACAACAGCAACTCAGCCACGAAGTGGTAGGCCACGTAAAATCACAGACCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481163 True 262 lncRNA 0.46 1 1923914 1924175

Neighbor

gene id symbol gene type direction distance location
CI01000304_01877287_01890608 SYK coding upstream 33168 1875390 ~ 1890746 (+)
CI01000304_01829156_01835147 ST8SIA4 coding upstream 88749 1829156 ~ 1835165 (+)
CI01000304_01718700_01722248 NA coding upstream 201638 1718328 ~ 1722276 (+)
CI01000304_01681164_01706159 ANKRD55 coding upstream 217517 1681164 ~ 1706397 (+)
CI01000304_01392985_01399147 CA9 coding upstream 524761 1392985 ~ 1399153 (+)
CI01000304_02136252_02167869 SEC31A coding downstream 212077 2136252 ~ 2168463 (+)
CI01000304_02206338_02219356 NA coding downstream 282163 2206338 ~ 2219642 (+)
CI01000304_02229520_02235812 HNRNPDL coding downstream 304964 2229139 ~ 2236204 (+)
CI01000304_02236583_02240921 HNRNPD coding downstream 312192 2236367 ~ 2241608 (+)
CI01000304_02254859_02262580 MAT2AL, METK1 coding downstream 329719 2253894 ~ 2264078 (+)
G418872 NA non-coding upstream 14589 1909119 ~ 1909325 (+)
G418865 NA non-coding upstream 23138 1899156 ~ 1900776 (+)
G418861 NA non-coding upstream 63808 1859877 ~ 1860106 (+)
G418860 NA non-coding upstream 65462 1858167 ~ 1858452 (+)
G418790 NA non-coding upstream 113922 1770567 ~ 1809992 (+)
G418884 NA non-coding downstream 244 1924419 ~ 1925229 (+)
G418885 NA non-coding downstream 1741 1925916 ~ 1926137 (+)
G418886 NA non-coding downstream 2047 1926222 ~ 1926560 (+)
G418909 NA non-coding downstream 135177 2059352 ~ 2066863 (+)
G418980 NA non-coding downstream 162135 2086310 ~ 2086528 (+)
G418116 NA other upstream 1048665 872670 ~ 875249 (+)
G418059 NA other upstream 1359463 558092 ~ 564451 (+)
G417987 NA other upstream 1696061 226703 ~ 227853 (+)
G418981 NA other downstream 168319 2092494 ~ 2093678 (+)
G420445 NA other downstream 2379161 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 3249048 5173426 ~ 5176791 (+)
G421162 NA other downstream 4317058 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 5428474 7352621 ~ 7354396 (+)

Expression


Co-expression Network