G418884


Basic Information

Item Value
gene id G418884
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1924419 ~ 1925229 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU481164
GTGTTCTCTGGAGTGACGAATCACGCTTCTCTGTCTGGAAATCTGATGGACAAGTCTGGGTTTGGCGGTTGCCAGGAGAACGGTACTTGCCTGACTGCATTGTGCCAAGTGTAAAGTTTGGTGGAGGGGGGATTATGGTGTGGGGTTGGGCTTGGCCCCTTAGTTCCAGTGGAAGGAACTCTTAATGCTTCAGCATACCAAGACATTTTGGACAATTTCATGCTCCCAACTTTGTGGGAAGAGTTTGGGGATGGCCCTGTTCCAACATGACTGCGCACCAGTGCACAAAGCAAGGTCCATAAAGACATGGATGAGTGAGTTTGGTGTGGAGGAACTTGACTGGCCTGCACAGAGTCCTGACCTCAACCCGATAGAACACCTTTGGGATGAATTAGAGCGGAGACTGCGAGCCAGGCCTTCTCGCCAACATCACTGCCTGACCTCACAAATGCACTTCTAGAAGAATGGTCAAAAATTCCCATAAACACACTCCTTAACCTTGTGGAAAGCCTTCCCAGAAGAGTTGAAGATGTTATAGCTGCAAAGGGTGGGCCAACTCCGTATTAAACCCTACGGATTAAGAATGGGATGTCATTAAAGTTCATGTGCACGTAAAGGCAGGCGTCTCAAAACTTTTGGCAATATAGTGTATGTCTTTAGTACCTTTCTGGATCTTGAGAGATTCAGTGACATTGCTGGCAATGGAGGCCTCAATGAGCCATCGGATTTCATCAAAAATATCTTAGTTTGTGTTCCAAAGATGAACGAAGGTCTTACGGGTGTAGAACAACATGAGGGTAAGTAAAAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU481164 True 811 lncRNA 0.46 1 1924419 1925229

Neighbor

gene id symbol gene type direction distance location
CI01000304_01877287_01890608 SYK coding upstream 33673 1875390 ~ 1890746 (+)
CI01000304_01829156_01835147 ST8SIA4 coding upstream 89254 1829156 ~ 1835165 (+)
CI01000304_01718700_01722248 NA coding upstream 202143 1718328 ~ 1722276 (+)
CI01000304_01681164_01706159 ANKRD55 coding upstream 218022 1681164 ~ 1706397 (+)
CI01000304_01392985_01399147 CA9 coding upstream 525266 1392985 ~ 1399153 (+)
CI01000304_02136252_02167869 SEC31A coding downstream 211023 2136252 ~ 2168463 (+)
CI01000304_02206338_02219356 NA coding downstream 281109 2206338 ~ 2219642 (+)
CI01000304_02229520_02235812 HNRNPDL coding downstream 303910 2229139 ~ 2236204 (+)
CI01000304_02236583_02240921 HNRNPD coding downstream 311138 2236367 ~ 2241608 (+)
CI01000304_02254859_02262580 MAT2AL, METK1 coding downstream 328665 2253894 ~ 2264078 (+)
G418883 NA non-coding upstream 244 1923914 ~ 1924175 (+)
G418872 NA non-coding upstream 15094 1909119 ~ 1909325 (+)
G418865 NA non-coding upstream 23643 1899156 ~ 1900776 (+)
G418861 NA non-coding upstream 64313 1859877 ~ 1860106 (+)
G418860 NA non-coding upstream 65967 1858167 ~ 1858452 (+)
G418885 NA non-coding downstream 687 1925916 ~ 1926137 (+)
G418886 NA non-coding downstream 993 1926222 ~ 1926560 (+)
G418909 NA non-coding downstream 134123 2059352 ~ 2066863 (+)
G418980 NA non-coding downstream 161081 2086310 ~ 2086528 (+)
G418998 NA non-coding downstream 255332 2180561 ~ 2184793 (+)
G418116 NA other upstream 1049170 872670 ~ 875249 (+)
G418059 NA other upstream 1359968 558092 ~ 564451 (+)
G417987 NA other upstream 1696566 226703 ~ 227853 (+)
G418981 NA other downstream 167265 2092494 ~ 2093678 (+)
G420445 NA other downstream 2378107 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 3247994 5173426 ~ 5176791 (+)
G421162 NA other downstream 4316004 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 5427420 7352621 ~ 7354396 (+)

Expression


Co-expression Network