Gene
RNA
| Item | Value |
|---|---|
| gene id | G418998 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 2180561 ~ 2184793 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU481299 | True | 460 | lncRNA | 0.42 | 2 | 2180561 | 2184793 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_02136252_02167869 | SEC31A | coding | upstream | 12098 | 2136252 ~ 2168463 (+) |
| CI01000304_01877287_01890608 | SYK | coding | upstream | 289815 | 1875390 ~ 1890746 (+) |
| CI01000304_01829156_01835147 | ST8SIA4 | coding | upstream | 345396 | 1829156 ~ 1835165 (+) |
| CI01000304_01718700_01722248 | NA | coding | upstream | 458285 | 1718328 ~ 1722276 (+) |
| CI01000304_01681164_01706159 | ANKRD55 | coding | upstream | 474164 | 1681164 ~ 1706397 (+) |
| CI01000304_02206338_02219356 | NA | coding | downstream | 21545 | 2206338 ~ 2219642 (+) |
| CI01000304_02229520_02235812 | HNRNPDL | coding | downstream | 44346 | 2229139 ~ 2236204 (+) |
| CI01000304_02236583_02240921 | HNRNPD | coding | downstream | 51574 | 2236367 ~ 2241608 (+) |
| CI01000304_02254859_02262580 | MAT2AL, METK1 | coding | downstream | 69101 | 2253894 ~ 2264078 (+) |
| CI01000304_02267341_02290220 | SNX30, SNX30.S | coding | downstream | 82548 | 2267341 ~ 2290283 (+) |
| G418980 | NA | non-coding | upstream | 94033 | 2086310 ~ 2086528 (+) |
| G418909 | NA | non-coding | upstream | 113698 | 2059352 ~ 2066863 (+) |
| G418886 | NA | non-coding | upstream | 254001 | 1926222 ~ 1926560 (+) |
| G418885 | NA | non-coding | upstream | 254424 | 1925916 ~ 1926137 (+) |
| G418884 | NA | non-coding | upstream | 255332 | 1924419 ~ 1925229 (+) |
| G419001 | NA | non-coding | downstream | 1938 | 2186731 ~ 2187419 (+) |
| G419006 | NA | non-coding | downstream | 43848 | 2228641 ~ 2228848 (+) |
| G419019 | NA | non-coding | downstream | 80973 | 2265766 ~ 2327739 (+) |
| G419081 | NA | non-coding | downstream | 238580 | 2423373 ~ 2423578 (+) |
| G418981 | NA | other | upstream | 86883 | 2092494 ~ 2093678 (+) |
| G418116 | NA | other | upstream | 1305312 | 872670 ~ 875249 (+) |
| G418059 | NA | other | upstream | 1616110 | 558092 ~ 564451 (+) |
| G417987 | NA | other | upstream | 1952708 | 226703 ~ 227853 (+) |
| G420445 | NA | other | downstream | 2118543 | 4303336 ~ 4303832 (+) |
| CI01000304_05173869_05175309 | NRARP, NRARP.L, NRARPA, NRARPB | other | downstream | 2988430 | 5173426 ~ 5176791 (+) |
| G421162 | NA | other | downstream | 4056440 | 6241233 ~ 6242997 (+) |
| CI01000304_07352697_07354032 | NA | other | downstream | 5167856 | 7352621 ~ 7354396 (+) |
| G421435 | NA | other | downstream | 5299348 | 7484141 ~ 7484688 (+) |
