Gene
RNA
| Item | Value |
|---|---|
| gene id | G419116 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 2487777 ~ 2547208 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU481430 | True | 5648 | lncRNA | 0.37 | 3 | 2487777 | 2547208 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_02267341_02290220 | SNX30, SNX30.S | coding | upstream | 197494 | 2267341 ~ 2290283 (+) |
| CI01000304_02254859_02262580 | MAT2AL, METK1 | coding | upstream | 223699 | 2253894 ~ 2264078 (+) |
| CI01000304_02236583_02240921 | HNRNPD | coding | upstream | 246169 | 2236367 ~ 2241608 (+) |
| CI01000304_02229520_02235812 | HNRNPDL | coding | upstream | 251573 | 2229139 ~ 2236204 (+) |
| CI01000304_02206338_02219356 | NA | coding | upstream | 268135 | 2206338 ~ 2219642 (+) |
| CI01000304_02558750_02584199 | NA | coding | downstream | 11542 | 2558750 ~ 2585195 (+) |
| CI01000304_02672677_02672967 | NA | coding | downstream | 125412 | 2672620 ~ 2673448 (+) |
| CI01000304_02810127_02814735 | NA | coding | downstream | 262919 | 2810127 ~ 2815076 (+) |
| CI01000304_02993734_03052509 | EPHA5 | coding | downstream | 446526 | 2993734 ~ 3054991 (+) |
| CI01000304_03127839_03154603 | NA | coding | downstream | 579385 | 3126593 ~ 3154797 (+) |
| G419114 | NA | non-coding | upstream | 2477 | 2484922 ~ 2485300 (+) |
| G419113 | NA | non-coding | upstream | 3175 | 2484332 ~ 2484602 (+) |
| G419092 | NA | non-coding | upstream | 47602 | 2439961 ~ 2440175 (+) |
| G419089 | NA | non-coding | upstream | 53605 | 2433964 ~ 2434172 (+) |
| G419083 | NA | non-coding | upstream | 62365 | 2425060 ~ 2425412 (+) |
| G419162 | NA | non-coding | downstream | 111915 | 2659123 ~ 2659415 (+) |
| G419542 | NA | non-coding | downstream | 138602 | 2685810 ~ 2690848 (+) |
| G419635 | NA | non-coding | downstream | 252346 | 2799554 ~ 2799821 (+) |
| G419636 | NA | non-coding | downstream | 253210 | 2800418 ~ 2800636 (+) |
| G419647 | NA | non-coding | downstream | 271733 | 2818941 ~ 2819261 (+) |
| G418981 | NA | other | upstream | 394099 | 2092494 ~ 2093678 (+) |
| G418116 | NA | other | upstream | 1612528 | 872670 ~ 875249 (+) |
| G418059 | NA | other | upstream | 1923326 | 558092 ~ 564451 (+) |
| G417987 | NA | other | upstream | 2259924 | 226703 ~ 227853 (+) |
| G420445 | NA | other | downstream | 1756128 | 4303336 ~ 4303832 (+) |
| CI01000304_05173869_05175309 | NRARP, NRARP.L, NRARPA, NRARPB | other | downstream | 2626015 | 5173426 ~ 5176791 (+) |
| G421162 | NA | other | downstream | 3694025 | 6241233 ~ 6242997 (+) |
| CI01000304_07352697_07354032 | NA | other | downstream | 4805441 | 7352621 ~ 7354396 (+) |
| G421435 | NA | other | downstream | 4936933 | 7484141 ~ 7484688 (+) |
