G419635


Basic Information

Item Value
gene id G419635
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 2799554 ~ 2799821 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482012
ATTGGATATGTTTGAGCCTTTTGGTTCAGGCACACACTCATAGGCCACTAGCTCATAGGCCACTAGAGTTAAGCCATTCGGCATGGTAGCCCAGGCACACATAGCCATATTGTTCACTAGAGCTAAGCCATTCGGTGTGATAGCCCAGGCACACATAGTCTAATAGGCCACTAGAGCCAAGCCTTATGGCCCAAAATACTTAGTTTAGTGGCACACATACACTGGTATGTAGGCACATATGTAGCTAACACCACATTGGTAAGTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482012 True 268 lncRNA 0.47 1 2799554 2799821

Neighbor

gene id symbol gene type direction distance location
CI01000304_02672677_02672967 NA coding upstream 126106 2672620 ~ 2673448 (+)
CI01000304_02558750_02584199 NA coding upstream 214359 2558750 ~ 2585195 (+)
CI01000304_02267341_02290220 SNX30, SNX30.S coding upstream 509271 2267341 ~ 2290283 (+)
CI01000304_02254859_02262580 MAT2AL, METK1 coding upstream 535476 2253894 ~ 2264078 (+)
CI01000304_02236583_02240921 HNRNPD coding upstream 557946 2236367 ~ 2241608 (+)
CI01000304_02810127_02814735 NA coding downstream 10306 2810127 ~ 2815076 (+)
CI01000304_02993734_03052509 EPHA5 coding downstream 193913 2993734 ~ 3054991 (+)
CI01000304_03127839_03154603 NA coding downstream 326772 3126593 ~ 3154797 (+)
CI01000304_03193646_03207372 LPAR1 coding downstream 393567 3193388 ~ 3208382 (+)
CI01000304_03261474_03267659 RASSF6 coding downstream 461653 3261474 ~ 3268074 (+)
G419542 NA non-coding upstream 108706 2685810 ~ 2690848 (+)
G419162 NA non-coding upstream 140139 2659123 ~ 2659415 (+)
G419115 NA non-coding upstream 248797 2538432 ~ 2550757 (+)
G419116 NA non-coding upstream 252346 2487777 ~ 2547208 (+)
G419114 NA non-coding upstream 314254 2484922 ~ 2485300 (+)
G419636 NA non-coding downstream 597 2800418 ~ 2800636 (+)
G419647 NA non-coding downstream 19120 2818941 ~ 2819261 (+)
G419724 NA non-coding downstream 141875 2941696 ~ 2941950 (+)
G419802 NA non-coding downstream 277782 3077603 ~ 3077809 (+)
G418981 NA other upstream 705876 2092494 ~ 2093678 (+)
G418116 NA other upstream 1924305 872670 ~ 875249 (+)
G418059 NA other upstream 2235103 558092 ~ 564451 (+)
G417987 NA other upstream 2571701 226703 ~ 227853 (+)
G420445 NA other downstream 1503515 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 2373402 5173426 ~ 5176791 (+)
G421162 NA other downstream 3441412 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 4552828 7352621 ~ 7354396 (+)
G421435 NA other downstream 4684320 7484141 ~ 7484688 (+)

Expression


Co-expression Network