Gene
RNA
| Item | Value |
|---|---|
| gene id | G419724 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 2941696 ~ 2941950 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU482111 | True | 219 | lncRNA | 0.34 | 2 | 2941696 | 2941950 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_02810127_02814735 | NA | coding | upstream | 126620 | 2810127 ~ 2815076 (+) |
| CI01000304_02672677_02672967 | NA | coding | upstream | 268248 | 2672620 ~ 2673448 (+) |
| CI01000304_02558750_02584199 | NA | coding | upstream | 356501 | 2558750 ~ 2585195 (+) |
| CI01000304_02267341_02290220 | SNX30, SNX30.S | coding | upstream | 651413 | 2267341 ~ 2290283 (+) |
| CI01000304_02254859_02262580 | MAT2AL, METK1 | coding | upstream | 677618 | 2253894 ~ 2264078 (+) |
| CI01000304_02993734_03052509 | EPHA5 | coding | downstream | 51784 | 2993734 ~ 3054991 (+) |
| CI01000304_03127839_03154603 | NA | coding | downstream | 184643 | 3126593 ~ 3154797 (+) |
| CI01000304_03193646_03207372 | LPAR1 | coding | downstream | 251438 | 3193388 ~ 3208382 (+) |
| CI01000304_03261474_03267659 | RASSF6 | coding | downstream | 319524 | 3261474 ~ 3268074 (+) |
| CI01000304_03278369_03283013 | TMEM267 | coding | downstream | 334358 | 3276308 ~ 3283183 (+) |
| G419647 | NA | non-coding | upstream | 122435 | 2818941 ~ 2819261 (+) |
| G419636 | NA | non-coding | upstream | 141060 | 2800418 ~ 2800636 (+) |
| G419635 | NA | non-coding | upstream | 141875 | 2799554 ~ 2799821 (+) |
| G419542 | NA | non-coding | upstream | 250848 | 2685810 ~ 2690848 (+) |
| G419162 | NA | non-coding | upstream | 282281 | 2659123 ~ 2659415 (+) |
| G419802 | NA | non-coding | downstream | 135653 | 3077603 ~ 3077809 (+) |
| G419806 | NA | non-coding | downstream | 142173 | 3084123 ~ 3084345 (+) |
| G419808 | NA | non-coding | downstream | 153755 | 3095705 ~ 3095938 (+) |
| G419862 | NA | non-coding | downstream | 227484 | 3169434 ~ 3306051 (+) |
| G418981 | NA | other | upstream | 848018 | 2092494 ~ 2093678 (+) |
| G418116 | NA | other | upstream | 2066447 | 872670 ~ 875249 (+) |
| G418059 | NA | other | upstream | 2377245 | 558092 ~ 564451 (+) |
| G417987 | NA | other | upstream | 2713843 | 226703 ~ 227853 (+) |
| G420445 | NA | other | downstream | 1361386 | 4303336 ~ 4303832 (+) |
| CI01000304_05173869_05175309 | NRARP, NRARP.L, NRARPA, NRARPB | other | downstream | 2231273 | 5173426 ~ 5176791 (+) |
| G421162 | NA | other | downstream | 3299283 | 6241233 ~ 6242997 (+) |
| CI01000304_07352697_07354032 | NA | other | downstream | 4410699 | 7352621 ~ 7354396 (+) |
| G421435 | NA | other | downstream | 4542191 | 7484141 ~ 7484688 (+) |
