G419840



Basic Information


Item Value
gene id G419840
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3079366 ~ 3079602 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU482238
AAAAACAATAAAAGCAATTAAAATTGCTGTTGTTGGAACCAGTCCAAGCAATTAAAATTGCTGTTTTTGCTCTCAAAGTAGAAATTCACTCTTCAGAGGTGAAAGGAAGATCCGAACCGATCGGCTCCGAAGCAAAAGTATGAATGGAAGTGAGTATGCCGGTCCTATTTATACCCGGATGCCGGGGGTGTGGTCCGGCGTGTAAATCTCACTGGCCAATTCCCATTGGCTTGTTTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU482238 True 237 lncRNA 0.43 1 3079366 3079602

Neighbor


gene id symbol gene type direction distance location
CI01000304_02900497_02900924 NA coding downstream 177264 2899799 ~ 2902102 (-)
CI01000304_02694838_02711363 NA coding downstream 367864 2694660 ~ 2711502 (-)
CI01000304_02595522_02611332 GRIN3A coding downstream 468034 2595522 ~ 2611332 (-)
CI01000304_02314977_02384157 NA coding downstream 695209 2314977 ~ 2384157 (-)
CI01000304_02299398_02304171 NA coding downstream 774204 2299143 ~ 2305162 (-)
CI01000304_03158811_03160301 NA coding upstream 78891 3158493 ~ 3160301 (-)
CI01000304_03214897_03241215 MUSK coding upstream 133881 3213483 ~ 3241215 (-)
CI01000304_03268621_03269674 NA coding upstream 189019 3268621 ~ 3270242 (-)
CI01000304_03305219_03313206 NA coding upstream 225617 3305219 ~ 3313398 (-)
CI01000304_03398119_03398652 NA coding upstream 318437 3398039 ~ 3400370 (-)
G419783 NA non-coding downstream 115563 2963590 ~ 2963803 (-)
G419777 NA non-coding downstream 137419 2941699 ~ 2941947 (-)
G419756 NA non-coding downstream 184877 2889285 ~ 2894489 (-)
G419640 NA non-coding downstream 275578 2803579 ~ 2803788 (-)
G419524 NA non-coding downstream 441542 2637538 ~ 2637824 (-)
G419842 NA non-coding upstream 5817 3085419 ~ 3086625 (-)
G420221 NA non-coding upstream 308076 3387678 ~ 3389213 (-)
G420150 NA non-coding upstream 340320 3419922 ~ 3478109 (-)
G421465 NA non-coding upstream 679816 3759418 ~ 3759745 (-)
G421471 NA non-coding upstream 709117 3788719 ~ 3788926 (-)
G419354 NA other downstream 813125 2262502 ~ 2266241 (-)
G419353 NA other downstream 843260 2229384 ~ 2236106 (-)
CI01000304_04263955_04264962 NA other upstream 1184143 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 1582214 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 3397849 6480743 ~ 6483986 (-)
G422354 NA other upstream 3551484 6631086 ~ 6631499 (-)
G422378 NA other upstream 3665077 6744679 ~ 6783046 (-)

Expression



Co-expression Network