G419806


Basic Information

Item Value
gene id G419806
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3084123 ~ 3084345 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482204
CTCTGAATTGTCAAAACATCTCTCAAAATGCGTGCCACAAATGTGAAAAATGCAGAAAATCGAACCGGATCCGAATTTTTTTTATGACGGACGAAAGTTTCGGAGGCAGTGTGTAAACATGATTGACACAACATGAGGTCGTATTTATTTGTTAATGTGTGAAAATTTCGGACGTGAATTTCGGACTCAGTGTGCAAAGGCCTTTACACCATCACAATTAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482204 True 223 lncRNA 0.39 1 3084123 3084345

Neighbor

gene id symbol gene type direction distance location
CI01000304_02993734_03052509 EPHA5 coding upstream 31614 2993734 ~ 3054991 (+)
CI01000304_02810127_02814735 NA coding upstream 269047 2810127 ~ 2815076 (+)
CI01000304_02672677_02672967 NA coding upstream 410675 2672620 ~ 2673448 (+)
CI01000304_02558750_02584199 NA coding upstream 498928 2558750 ~ 2585195 (+)
CI01000304_02267341_02290220 SNX30, SNX30.S coding upstream 793840 2267341 ~ 2290283 (+)
CI01000304_03127839_03154603 NA coding downstream 42248 3126593 ~ 3154797 (+)
CI01000304_03193646_03207372 LPAR1 coding downstream 109043 3193388 ~ 3208382 (+)
CI01000304_03261474_03267659 RASSF6 coding downstream 177129 3261474 ~ 3268074 (+)
CI01000304_03278369_03283013 TMEM267 coding downstream 191963 3276308 ~ 3283183 (+)
CI01000304_03353284_03357099 NA coding downstream 267396 3351741 ~ 3357564 (+)
G419802 NA non-coding upstream 6314 3077603 ~ 3077809 (+)
G419724 NA non-coding upstream 142173 2941696 ~ 2941950 (+)
G419647 NA non-coding upstream 264862 2818941 ~ 2819261 (+)
G419636 NA non-coding upstream 283487 2800418 ~ 2800636 (+)
G419808 NA non-coding downstream 11360 3095705 ~ 3095938 (+)
G419862 NA non-coding downstream 85089 3169434 ~ 3306051 (+)
G419875 NA non-coding downstream 203056 3287401 ~ 3379400 (+)
G419937 NA non-coding downstream 297178 3381523 ~ 3381763 (+)
G419940 NA non-coding downstream 304832 3389177 ~ 3389441 (+)
G418981 NA other upstream 990445 2092494 ~ 2093678 (+)
G418116 NA other upstream 2208874 872670 ~ 875249 (+)
G418059 NA other upstream 2519672 558092 ~ 564451 (+)
G417987 NA other upstream 2856270 226703 ~ 227853 (+)
G420445 NA other downstream 1218991 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 2088878 5173426 ~ 5176791 (+)
G421162 NA other downstream 3156888 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 4268304 7352621 ~ 7354396 (+)
G421435 NA other downstream 4399796 7484141 ~ 7484688 (+)

Expression


Co-expression Network