G419808


Basic Information

Item Value
gene id G419808
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3095705 ~ 3095938 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482206
TTTTTTTCCTCACCAGCCACTGTGGCTAGTGGTTTTCTTTCTCAACTGTTTACGTTCATTTAAGACATAACTGACTGTGTTTAACTGAATACTCTCCAAGACTAGCATTTTGACATTATTTTGTGTGTATTTGACTGTTTAAGCTCAATAAGCAACAAAAAAAGAACTCAGTTTAGTACTGAGTACTAAATTTTACAATTTAGAAAAATCTGTGGGAATGAGTAAAATTATGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482206 True 234 lncRNA 0.32 1 3095705 3095938

Neighbor

gene id symbol gene type direction distance location
CI01000304_02993734_03052509 EPHA5 coding upstream 43196 2993734 ~ 3054991 (+)
CI01000304_02810127_02814735 NA coding upstream 280629 2810127 ~ 2815076 (+)
CI01000304_02672677_02672967 NA coding upstream 422257 2672620 ~ 2673448 (+)
CI01000304_02558750_02584199 NA coding upstream 510510 2558750 ~ 2585195 (+)
CI01000304_02267341_02290220 SNX30, SNX30.S coding upstream 805422 2267341 ~ 2290283 (+)
CI01000304_03127839_03154603 NA coding downstream 30655 3126593 ~ 3154797 (+)
CI01000304_03193646_03207372 LPAR1 coding downstream 97450 3193388 ~ 3208382 (+)
CI01000304_03261474_03267659 RASSF6 coding downstream 165536 3261474 ~ 3268074 (+)
CI01000304_03278369_03283013 TMEM267 coding downstream 180370 3276308 ~ 3283183 (+)
CI01000304_03353284_03357099 NA coding downstream 255803 3351741 ~ 3357564 (+)
G419806 NA non-coding upstream 11360 3084123 ~ 3084345 (+)
G419802 NA non-coding upstream 17896 3077603 ~ 3077809 (+)
G419724 NA non-coding upstream 153755 2941696 ~ 2941950 (+)
G419647 NA non-coding upstream 276444 2818941 ~ 2819261 (+)
G419862 NA non-coding downstream 73496 3169434 ~ 3306051 (+)
G419875 NA non-coding downstream 191463 3287401 ~ 3379400 (+)
G419937 NA non-coding downstream 285585 3381523 ~ 3381763 (+)
G419940 NA non-coding downstream 293239 3389177 ~ 3389441 (+)
G420104 NA non-coding downstream 596762 3692700 ~ 3695368 (+)
G418981 NA other upstream 1002027 2092494 ~ 2093678 (+)
G418116 NA other upstream 2220456 872670 ~ 875249 (+)
G418059 NA other upstream 2531254 558092 ~ 564451 (+)
G417987 NA other upstream 2867852 226703 ~ 227853 (+)
G420445 NA other downstream 1207398 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 2077285 5173426 ~ 5176791 (+)
G421162 NA other downstream 3145295 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 4256711 7352621 ~ 7354396 (+)
G421435 NA other downstream 4388203 7484141 ~ 7484688 (+)

Expression


Co-expression Network