G419862


Basic Information

Item Value
gene id G419862
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3169434 ~ 3306051 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482262
TCTGAGCTCTGTTCTTCAGAAAAAATCTCCAGGTCCTGCAGATTCTTCAGATTTCAAGCATTTTTTGCATATTTGAACCCTTTCCAGCAGTGACTGTATGATTTTGAGATCCATCTTTTCACACTGAGGACAATTGAGGGACTCAAACACAACTATTAAAAAAGGTTCAAACATTCACTGATGCTCCAGAAGGAAACACGATGCATTAAGAGCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482262 True 216 lncRNA 0.39 2 3169434 3306051

Neighbor

gene id symbol gene type direction distance location
CI01000304_03127839_03154603 NA coding upstream 14637 3126593 ~ 3154797 (+)
CI01000304_02993734_03052509 EPHA5 coding upstream 116925 2993734 ~ 3054991 (+)
CI01000304_02810127_02814735 NA coding upstream 354358 2810127 ~ 2815076 (+)
CI01000304_02672677_02672967 NA coding upstream 495986 2672620 ~ 2673448 (+)
CI01000304_02558750_02584199 NA coding upstream 584239 2558750 ~ 2585195 (+)
CI01000304_03353284_03357099 NA coding downstream 45690 3351741 ~ 3357564 (+)
CI01000304_03376929_03378015 NA coding downstream 70820 3376871 ~ 3378183 (+)
CI01000304_03615644_03617791 NA coding downstream 308882 3614933 ~ 3618408 (+)
CI01000304_03666156_03669795 NA coding downstream 360105 3666156 ~ 3670934 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding downstream 668981 3975032 ~ 3978545 (+)
G419808 NA non-coding upstream 73496 3095705 ~ 3095938 (+)
G419806 NA non-coding upstream 85089 3084123 ~ 3084345 (+)
G419802 NA non-coding upstream 91625 3077603 ~ 3077809 (+)
G419724 NA non-coding upstream 227484 2941696 ~ 2941950 (+)
G419937 NA non-coding downstream 75472 3381523 ~ 3381763 (+)
G419940 NA non-coding downstream 83126 3389177 ~ 3389441 (+)
G420104 NA non-coding downstream 386649 3692700 ~ 3695368 (+)
G420295 NA non-coding downstream 437790 3743841 ~ 3744102 (+)
G420301 NA non-coding downstream 453446 3759497 ~ 3759761 (+)
G418981 NA other upstream 1075756 2092494 ~ 2093678 (+)
G418116 NA other upstream 2294185 872670 ~ 875249 (+)
G418059 NA other upstream 2604983 558092 ~ 564451 (+)
G417987 NA other upstream 2941581 226703 ~ 227853 (+)
G420445 NA other downstream 997285 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 1867172 5173426 ~ 5176791 (+)
G421162 NA other downstream 2935182 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 4046598 7352621 ~ 7354396 (+)
G421435 NA other downstream 4178090 7484141 ~ 7484688 (+)

Expression


Co-expression Network