G420104


Basic Information

Item Value
gene id G420104
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3692700 ~ 3695368 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482520
GTTTATTGGACACAAGCAGAGGTAACAGTGACAACAGGTGAGTAGATTGTGGTTGTAGAGGTGAATGACGAATGAATGGGTGATAATACTGTCCTTTTGTGGTTTGCAGGTTGATGGCGGTGGCAGACTGGAGACAATGCTGGCGGATGACACTCACACACAGACTTGGAGCACACGAGGTAGCACGGAGACACAGGAGACAGGTAAGTAGCAATGGGAGTCCTTGAGGTAAGCATAGAGGTAAGTTCCTTGATGCGAACGAGACCGGACAATGTGACTGAGTGTGTGAGTGTCTTAAATAGTGCTCGTGATGAGTGTGCTGATGAGATGCAGGTGGCGGTGATTATTACTCAGGGGAAGGTGTGCGTTGTGATTGGTGGGTGCTGGAGCCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482520 True 394 lncRNA 0.50 2 3692700 3695368

Neighbor

gene id symbol gene type direction distance location
CI01000304_03666156_03669795 NA coding upstream 21766 3666156 ~ 3670934 (+)
CI01000304_03615644_03617791 NA coding upstream 74292 3614933 ~ 3618408 (+)
CI01000304_03376929_03378015 NA coding upstream 314517 3376871 ~ 3378183 (+)
CI01000304_03353284_03357099 NA coding upstream 335136 3351741 ~ 3357564 (+)
CI01000304_03278369_03283013 TMEM267 coding upstream 409517 3276308 ~ 3283183 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding downstream 279664 3975032 ~ 3978545 (+)
CI01000304_03984177_03996203 KATNAL2 coding downstream 288809 3984177 ~ 3996401 (+)
CI01000304_04170630_04190266 NA coding downstream 475262 4170630 ~ 4190266 (+)
CI01000304_04190428_04208535 NA coding downstream 495060 4190428 ~ 4208698 (+)
CI01000304_04223309_04223602 NA coding downstream 527941 4223309 ~ 4223769 (+)
G419940 NA non-coding upstream 303259 3389177 ~ 3389441 (+)
G419937 NA non-coding upstream 310937 3381523 ~ 3381763 (+)
G419875 NA non-coding upstream 313300 3287401 ~ 3379400 (+)
G419862 NA non-coding upstream 386649 3169434 ~ 3306051 (+)
G419808 NA non-coding upstream 596762 3095705 ~ 3095938 (+)
G420295 NA non-coding downstream 48473 3743841 ~ 3744102 (+)
G420301 NA non-coding downstream 64129 3759497 ~ 3759761 (+)
G420319 NA non-coding downstream 119925 3815293 ~ 3815758 (+)
G420330 NA non-coding downstream 138852 3834220 ~ 3834606 (+)
G420333 NA non-coding downstream 247084 3942452 ~ 4009996 (+)
G418981 NA other upstream 1599022 2092494 ~ 2093678 (+)
G418116 NA other upstream 2817451 872670 ~ 875249 (+)
G418059 NA other upstream 3128249 558092 ~ 564451 (+)
G417987 NA other upstream 3464847 226703 ~ 227853 (+)
G420445 NA other downstream 607968 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 1477855 5173426 ~ 5176791 (+)
G421162 NA other downstream 2545865 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3657281 7352621 ~ 7354396 (+)
G421435 NA other downstream 3788773 7484141 ~ 7484688 (+)

Expression


Co-expression Network