G420295


Basic Information

Item Value
gene id G420295
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3743841 ~ 3744102 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482725
CCCGGCTCCAAATGATGAGAACCTGCAACAGCATATGCCTCCCACCAACCATATGCTTCTGTAGGTCAAAATTTTAAAAAATAATGAAAATAACTTTTTTTTTTTTTTTTTTTTTTTAGTGTGTTTGTTTGCCAAATCAAGCAAAACTACAGGTTTTATGCAAAATTTGTTTTACTGCGTGTTCTACTAAGAGTTCTTTGGATATCATGGTCATTTTATGTTACTGCCTCAGATTGTTGGTCCATTAGAAGGCCTGGTTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482725 True 262 lncRNA 0.34 1 3743841 3744102

Neighbor

gene id symbol gene type direction distance location
CI01000304_03666156_03669795 NA coding upstream 72907 3666156 ~ 3670934 (+)
CI01000304_03615644_03617791 NA coding upstream 125433 3614933 ~ 3618408 (+)
CI01000304_03376929_03378015 NA coding upstream 365658 3376871 ~ 3378183 (+)
CI01000304_03353284_03357099 NA coding upstream 386277 3351741 ~ 3357564 (+)
CI01000304_03278369_03283013 TMEM267 coding upstream 460658 3276308 ~ 3283183 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding downstream 230930 3975032 ~ 3978545 (+)
CI01000304_03984177_03996203 KATNAL2 coding downstream 240075 3984177 ~ 3996401 (+)
CI01000304_04170630_04190266 NA coding downstream 426528 4170630 ~ 4190266 (+)
CI01000304_04190428_04208535 NA coding downstream 446326 4190428 ~ 4208698 (+)
CI01000304_04223309_04223602 NA coding downstream 479207 4223309 ~ 4223769 (+)
G420104 NA non-coding upstream 48473 3692700 ~ 3695368 (+)
G419940 NA non-coding upstream 354400 3389177 ~ 3389441 (+)
G419937 NA non-coding upstream 362078 3381523 ~ 3381763 (+)
G419875 NA non-coding upstream 364441 3287401 ~ 3379400 (+)
G419862 NA non-coding upstream 437790 3169434 ~ 3306051 (+)
G420301 NA non-coding downstream 15395 3759497 ~ 3759761 (+)
G420319 NA non-coding downstream 71191 3815293 ~ 3815758 (+)
G420330 NA non-coding downstream 90118 3834220 ~ 3834606 (+)
G420333 NA non-coding downstream 198350 3942452 ~ 4009996 (+)
G420454 NA non-coding downstream 319169 4063271 ~ 4063547 (+)
G418981 NA other upstream 1650163 2092494 ~ 2093678 (+)
G418116 NA other upstream 2868592 872670 ~ 875249 (+)
G418059 NA other upstream 3179390 558092 ~ 564451 (+)
G417987 NA other upstream 3515988 226703 ~ 227853 (+)
G420445 NA other downstream 559234 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 1429121 5173426 ~ 5176791 (+)
G421162 NA other downstream 2497131 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3608547 7352621 ~ 7354396 (+)
G421435 NA other downstream 3740039 7484141 ~ 7484688 (+)

Expression


Co-expression Network