Gene
RNA
| Item | Value |
|---|---|
| gene id | G420333 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 3942452 ~ 4009996 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU482765 | False | 489 | lncRNA | 0.35 | 2 | 3942452 | 4003768 |
| TU482766 | True | 1202 | lncRNA | 0.32 | 2 | 4002893 | 4009996 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_03666156_03669795 | NA | coding | upstream | 271518 | 3666156 ~ 3670934 (+) |
| CI01000304_03615644_03617791 | NA | coding | upstream | 324044 | 3614933 ~ 3618408 (+) |
| CI01000304_03376929_03378015 | NA | coding | upstream | 564269 | 3376871 ~ 3378183 (+) |
| CI01000304_03353284_03357099 | NA | coding | upstream | 584888 | 3351741 ~ 3357564 (+) |
| CI01000304_03278369_03283013 | TMEM267 | coding | upstream | 659269 | 3276308 ~ 3283183 (+) |
| CI01000304_04170630_04190266 | NA | coding | downstream | 160634 | 4170630 ~ 4190266 (+) |
| CI01000304_04190428_04208535 | NA | coding | downstream | 180432 | 4190428 ~ 4208698 (+) |
| CI01000304_04223309_04223602 | NA | coding | downstream | 213313 | 4223309 ~ 4223769 (+) |
| CI01000304_04236578_04239825 | NA | coding | downstream | 226342 | 4236338 ~ 4240395 (+) |
| CI01000304_04318151_04331824 | SH3BP2 | coding | downstream | 308155 | 4318151 ~ 4331892 (+) |
| G420330 | NA | non-coding | upstream | 107846 | 3834220 ~ 3834606 (+) |
| G420319 | NA | non-coding | upstream | 126694 | 3815293 ~ 3815758 (+) |
| G420301 | NA | non-coding | upstream | 182691 | 3759497 ~ 3759761 (+) |
| G420295 | NA | non-coding | upstream | 198350 | 3743841 ~ 3744102 (+) |
| G420104 | NA | non-coding | upstream | 247084 | 3692700 ~ 3695368 (+) |
| G420454 | NA | non-coding | downstream | 53275 | 4063271 ~ 4063547 (+) |
| G420456 | NA | non-coding | downstream | 61707 | 4071703 ~ 4071957 (+) |
| G420464 | NA | non-coding | downstream | 95641 | 4105637 ~ 4105877 (+) |
| G420466 | NA | non-coding | downstream | 97242 | 4107238 ~ 4107558 (+) |
| G420436 | NA | non-coding | downstream | 223813 | 4233809 ~ 4275246 (+) |
| G418981 | NA | other | upstream | 1848774 | 2092494 ~ 2093678 (+) |
| G418116 | NA | other | upstream | 3067203 | 872670 ~ 875249 (+) |
| G418059 | NA | other | upstream | 3378001 | 558092 ~ 564451 (+) |
| G417987 | NA | other | upstream | 3714599 | 226703 ~ 227853 (+) |
| G420445 | NA | other | downstream | 293340 | 4303336 ~ 4303832 (+) |
| CI01000304_05173869_05175309 | NRARP, NRARP.L, NRARPA, NRARPB | other | downstream | 1163227 | 5173426 ~ 5176791 (+) |
| G421162 | NA | other | downstream | 2231237 | 6241233 ~ 6242997 (+) |
| CI01000304_07352697_07354032 | NA | other | downstream | 3342653 | 7352621 ~ 7354396 (+) |
| G421435 | NA | other | downstream | 3474145 | 7484141 ~ 7484688 (+) |
