G420454


Basic Information

Item Value
gene id G420454
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4063271 ~ 4063547 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482923
CTTTTTTTAAAGATTTTACTTGTGCTGTGTGTTGGGGAAACTACTTCAAAAAACTGTAATACACAGCTTATAATCAAGTCATAATTAGCCGCATCCATCACTAAATTTTGTTGGTGGTTTGGTTTTGTATTTCTGCTGTGTCAGGCTTGGTAACCTCACCCAACGAAAACTCATTAGACCAAAATTTCATTCCTCATGTATATTATGTTTTCTTCACATTCTATCGGAATTACCATAAATACGAGTTTCCTAGTTAAGAGTTGGACATGAATGCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482923 True 277 lncRNA 0.35 1 4063271 4063547

Neighbor

gene id symbol gene type direction distance location
CI01000304_03984177_03996203 KATNAL2 coding upstream 66870 3984177 ~ 3996401 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding upstream 84726 3975032 ~ 3978545 (+)
CI01000304_03666156_03669795 NA coding upstream 392337 3666156 ~ 3670934 (+)
CI01000304_03615644_03617791 NA coding upstream 444863 3614933 ~ 3618408 (+)
CI01000304_03376929_03378015 NA coding upstream 685088 3376871 ~ 3378183 (+)
CI01000304_04170630_04190266 NA coding downstream 107083 4170630 ~ 4190266 (+)
CI01000304_04190428_04208535 NA coding downstream 126881 4190428 ~ 4208698 (+)
CI01000304_04223309_04223602 NA coding downstream 159762 4223309 ~ 4223769 (+)
CI01000304_04236578_04239825 NA coding downstream 172791 4236338 ~ 4240395 (+)
CI01000304_04318151_04331824 SH3BP2 coding downstream 254604 4318151 ~ 4331892 (+)
G420333 NA non-coding upstream 53275 3942452 ~ 4009996 (+)
G420330 NA non-coding upstream 228665 3834220 ~ 3834606 (+)
G420319 NA non-coding upstream 247513 3815293 ~ 3815758 (+)
G420301 NA non-coding upstream 303510 3759497 ~ 3759761 (+)
G420295 NA non-coding upstream 319169 3743841 ~ 3744102 (+)
G420456 NA non-coding downstream 8156 4071703 ~ 4071957 (+)
G420464 NA non-coding downstream 42090 4105637 ~ 4105877 (+)
G420466 NA non-coding downstream 43691 4107238 ~ 4107558 (+)
G420436 NA non-coding downstream 170262 4233809 ~ 4275246 (+)
G420438 NA non-coding downstream 199901 4263448 ~ 4265201 (+)
G418981 NA other upstream 1969593 2092494 ~ 2093678 (+)
G418116 NA other upstream 3188022 872670 ~ 875249 (+)
G418059 NA other upstream 3498820 558092 ~ 564451 (+)
G417987 NA other upstream 3835418 226703 ~ 227853 (+)
G420445 NA other downstream 239789 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 1109676 5173426 ~ 5176791 (+)
G421162 NA other downstream 2177686 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3289102 7352621 ~ 7354396 (+)
G421435 NA other downstream 3420594 7484141 ~ 7484688 (+)

Expression


Co-expression Network