G420464


Basic Information

Item Value
gene id G420464
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4105637 ~ 4105877 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482933
TATCATGTCTCGCGTAATAGCTCAATCAGTGTTTCAACCTCGGAAAGACGTCAATAAAACAGCTTGTAAACAATGTCACGTAACGTCACATTTACCTCAGAAAAACATATTCAGTGACCATAAACTCATTAGTCAGCTAGAAAAATGAACTCTAGAAAGCAGCATTCTGATAAATATAGCTATGCACCGTTACATATTCATTATAATGTTCTTCAATATTTAATGCATGTTTGAATAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482933 True 241 lncRNA 0.33 1 4105637 4105877

Neighbor

gene id symbol gene type direction distance location
CI01000304_03984177_03996203 KATNAL2 coding upstream 109236 3984177 ~ 3996401 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding upstream 127092 3975032 ~ 3978545 (+)
CI01000304_03666156_03669795 NA coding upstream 434703 3666156 ~ 3670934 (+)
CI01000304_03615644_03617791 NA coding upstream 487229 3614933 ~ 3618408 (+)
CI01000304_03376929_03378015 NA coding upstream 727454 3376871 ~ 3378183 (+)
CI01000304_04170630_04190266 NA coding downstream 64753 4170630 ~ 4190266 (+)
CI01000304_04190428_04208535 NA coding downstream 84551 4190428 ~ 4208698 (+)
CI01000304_04223309_04223602 NA coding downstream 117432 4223309 ~ 4223769 (+)
CI01000304_04236578_04239825 NA coding downstream 130461 4236338 ~ 4240395 (+)
CI01000304_04318151_04331824 SH3BP2 coding downstream 212274 4318151 ~ 4331892 (+)
G420456 NA non-coding upstream 33680 4071703 ~ 4071957 (+)
G420454 NA non-coding upstream 42090 4063271 ~ 4063547 (+)
G420333 NA non-coding upstream 95641 3942452 ~ 4009996 (+)
G420330 NA non-coding upstream 271031 3834220 ~ 3834606 (+)
G420319 NA non-coding upstream 289879 3815293 ~ 3815758 (+)
G420466 NA non-coding downstream 1361 4107238 ~ 4107558 (+)
G420436 NA non-coding downstream 127932 4233809 ~ 4275246 (+)
G420438 NA non-coding downstream 157571 4263448 ~ 4265201 (+)
G420504 NA non-coding downstream 187688 4293565 ~ 4293939 (+)
G420513 NA non-coding downstream 202942 4308819 ~ 4309407 (+)
G418981 NA other upstream 2011959 2092494 ~ 2093678 (+)
G418116 NA other upstream 3230388 872670 ~ 875249 (+)
G418059 NA other upstream 3541186 558092 ~ 564451 (+)
G417987 NA other upstream 3877784 226703 ~ 227853 (+)
G420445 NA other downstream 197459 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 1067346 5173426 ~ 5176791 (+)
G421162 NA other downstream 2135356 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3246772 7352621 ~ 7354396 (+)
G421435 NA other downstream 3378264 7484141 ~ 7484688 (+)

Expression


Co-expression Network