Gene
RNA
| Item | Value |
|---|---|
| gene id | G420438 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 4263448 ~ 4265201 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU482886 | True | 1571 | lncRNA | 0.40 | 2 | 4263448 | 4265201 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_04236578_04239825 | NA | coding | upstream | 23053 | 4236338 ~ 4240395 (+) |
| CI01000304_04223309_04223602 | NA | coding | upstream | 39679 | 4223309 ~ 4223769 (+) |
| CI01000304_04190428_04208535 | NA | coding | upstream | 54750 | 4190428 ~ 4208698 (+) |
| CI01000304_04170630_04190266 | NA | coding | upstream | 73182 | 4170630 ~ 4190266 (+) |
| CI01000304_03984177_03996203 | KATNAL2 | coding | upstream | 267047 | 3984177 ~ 3996401 (+) |
| CI01000304_04318151_04331824 | SH3BP2 | coding | downstream | 52950 | 4318151 ~ 4331892 (+) |
| CI01000304_04346530_04362348 | VLDLR | coding | downstream | 81329 | 4346530 ~ 4363156 (+) |
| CI01000304_04365876_04367947 | KCNV2, KCNV2A | coding | downstream | 100410 | 4365611 ~ 4368201 (+) |
| CI01000304_04381131_04396006 | TRAPPC13 | coding | downstream | 115930 | 4381131 ~ 4396075 (+) |
| CI01000304_04407815_04421342 | NLN | coding | downstream | 142153 | 4407354 ~ 4421434 (+) |
| G420466 | NA | non-coding | upstream | 155890 | 4107238 ~ 4107558 (+) |
| G420464 | NA | non-coding | upstream | 157571 | 4105637 ~ 4105877 (+) |
| G420456 | NA | non-coding | upstream | 191491 | 4071703 ~ 4071957 (+) |
| G420454 | NA | non-coding | upstream | 199901 | 4063271 ~ 4063547 (+) |
| G420333 | NA | non-coding | upstream | 253452 | 3942452 ~ 4009996 (+) |
| G420504 | NA | non-coding | downstream | 28364 | 4293565 ~ 4293939 (+) |
| G420513 | NA | non-coding | downstream | 43618 | 4308819 ~ 4309407 (+) |
| G420642 | NA | non-coding | downstream | 286865 | 4552066 ~ 4552528 (+) |
| G420655 | NA | non-coding | downstream | 354921 | 4620122 ~ 4620710 (+) |
| G420663 | NA | non-coding | downstream | 367129 | 4632330 ~ 4632603 (+) |
| G418981 | NA | other | upstream | 2169770 | 2092494 ~ 2093678 (+) |
| G418116 | NA | other | upstream | 3388199 | 872670 ~ 875249 (+) |
| G418059 | NA | other | upstream | 3698997 | 558092 ~ 564451 (+) |
| G417987 | NA | other | upstream | 4035595 | 226703 ~ 227853 (+) |
| G420445 | NA | other | downstream | 38135 | 4303336 ~ 4303832 (+) |
| CI01000304_05173869_05175309 | NRARP, NRARP.L, NRARPA, NRARPB | other | downstream | 908022 | 5173426 ~ 5176791 (+) |
| G421162 | NA | other | downstream | 1976032 | 6241233 ~ 6242997 (+) |
| CI01000304_07352697_07354032 | NA | other | downstream | 3087448 | 7352621 ~ 7354396 (+) |
| G421435 | NA | other | downstream | 3218940 | 7484141 ~ 7484688 (+) |
