G420504


Basic Information

Item Value
gene id G420504
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4293565 ~ 4293939 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482978
GTTAATACGTAGGTATTAATACGTAACTTTAAAAGACACAAAACTTACATTTTTGTACGTTTAGAAAGGTGCTAAAACGTACAATATTGACGTAATTATGGCACTAAAACGTAAAAATACTTACGTTTTTACAGCGAAAAAACGTAAAATATTTACGAATCTTTCATGTCATAAAGATATATGTATAATTTCCATTTTATCGTTTTGTAGATAAATGTAAGATCCCTAAACACCATCCCGAACCTAAACCTACCCATTTTATACATAATGTTTAAAGAATAAAACATAAAGAACAGAAATGCGTAGGAAAATGACAATTTTAGTAAAAAATATAACATTAAAACGATATTTTGATCCACTAATCCTACACCTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482978 True 375 lncRNA 0.28 1 4293565 4293939

Neighbor

gene id symbol gene type direction distance location
CI01000304_04236578_04239825 NA coding upstream 53170 4236338 ~ 4240395 (+)
CI01000304_04223309_04223602 NA coding upstream 69796 4223309 ~ 4223769 (+)
CI01000304_04190428_04208535 NA coding upstream 84867 4190428 ~ 4208698 (+)
CI01000304_04170630_04190266 NA coding upstream 103299 4170630 ~ 4190266 (+)
CI01000304_03984177_03996203 KATNAL2 coding upstream 297164 3984177 ~ 3996401 (+)
CI01000304_04318151_04331824 SH3BP2 coding downstream 24212 4318151 ~ 4331892 (+)
CI01000304_04346530_04362348 VLDLR coding downstream 52591 4346530 ~ 4363156 (+)
CI01000304_04365876_04367947 KCNV2, KCNV2A coding downstream 71672 4365611 ~ 4368201 (+)
CI01000304_04381131_04396006 TRAPPC13 coding downstream 87192 4381131 ~ 4396075 (+)
CI01000304_04407815_04421342 NLN coding downstream 113415 4407354 ~ 4421434 (+)
G420436 NA non-coding upstream 18319 4233809 ~ 4275246 (+)
G420438 NA non-coding upstream 28364 4263448 ~ 4265201 (+)
G420466 NA non-coding upstream 186007 4107238 ~ 4107558 (+)
G420464 NA non-coding upstream 187688 4105637 ~ 4105877 (+)
G420456 NA non-coding upstream 221608 4071703 ~ 4071957 (+)
G420513 NA non-coding downstream 14880 4308819 ~ 4309407 (+)
G420642 NA non-coding downstream 258127 4552066 ~ 4552528 (+)
G420655 NA non-coding downstream 326183 4620122 ~ 4620710 (+)
G420663 NA non-coding downstream 338391 4632330 ~ 4632603 (+)
G420556 NA non-coding downstream 345524 4639463 ~ 4645086 (+)
G418981 NA other upstream 2199887 2092494 ~ 2093678 (+)
G418116 NA other upstream 3418316 872670 ~ 875249 (+)
G418059 NA other upstream 3729114 558092 ~ 564451 (+)
G417987 NA other upstream 4065712 226703 ~ 227853 (+)
G420445 NA other downstream 9397 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 879284 5173426 ~ 5176791 (+)
G421162 NA other downstream 1947294 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3058710 7352621 ~ 7354396 (+)
G421435 NA other downstream 3190202 7484141 ~ 7484688 (+)

Expression


Co-expression Network