Gene
RNA
| Item | Value |
|---|---|
| gene id | G421719 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 4303156 ~ 4303880 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484337 | False | 725 | lncRNA | 0.42 | 1 | 4303156 | 4303880 |
| TU484335 | False | 433 | lncRNA | 0.48 | 1 | 4303448 | 4303880 |
| TU484339 | False | 362 | lncRNA | 0.47 | 1 | 4303448 | 4303809 |
| TU484334 | False | 319 | lncRNA | 0.50 | 1 | 4303562 | 4303880 |
| TU484343 | True | 248 | lncRNA | 0.50 | 1 | 4303562 | 4303809 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_04269487_04273391 | NA | coding | downstream | 29765 | 4269202 ~ 4273391 (-) |
| CI01000304_04263955_04264962 | NA | coding | downstream | 38194 | 4263846 ~ 4265201 (-) |
| CI01000304_04253975_04256004 | NA | coding | downstream | 45554 | 4253411 ~ 4257602 (-) |
| CI01000304_04230808_04231542 | NA | coding | downstream | 71255 | 4229815 ~ 4231901 (-) |
| CI01000304_04227914_04228723 | NA | coding | downstream | 74013 | 4227120 ~ 4229143 (-) |
| CI01000304_04370274_04377315 | PUM3 | coding | upstream | 66394 | 4370274 ~ 4377481 (-) |
| CI01000304_04396799_04405867 | SGTB | coding | upstream | 92908 | 4396788 ~ 4405867 (-) |
| CI01000304_04429949_04448465 | NA | coding | upstream | 125737 | 4429617 ~ 4448468 (-) |
| CI01000304_04458463_04459040 | NA | coding | upstream | 153733 | 4457613 ~ 4459234 (-) |
| CI01000304_04517750_04518058 | NA | coding | upstream | 213714 | 4517594 ~ 4518058 (-) |
| G421663 | NA | non-coding | downstream | 65396 | 4236297 ~ 4237760 (-) |
| G421655 | NA | non-coding | downstream | 195599 | 4107263 ~ 4107557 (-) |
| CI01000304_04007023_04008270 | YEE9, IER3IP1 | non-coding | downstream | 294877 | 4006069 ~ 4009056 (-) |
| G421471 | NA | non-coding | downstream | 514230 | 3788719 ~ 3788926 (-) |
| G421465 | NA | non-coding | downstream | 543411 | 3759418 ~ 3759745 (-) |
| G421723 | NA | non-coding | upstream | 8479 | 4312359 ~ 4314973 (-) |
| G421728 | NA | non-coding | upstream | 31844 | 4335724 ~ 4335942 (-) |
| G421740 | NA | non-coding | upstream | 59586 | 4363466 ~ 4363736 (-) |
| G421741 | NA | non-coding | upstream | 60398 | 4364278 ~ 4364601 (-) |
| G421742 | NA | non-coding | upstream | 60855 | 4364735 ~ 4365021 (-) |
| G419354 | NA | other | downstream | 2036915 | 2262502 ~ 2266241 (-) |
| G419353 | NA | other | downstream | 2067050 | 2229384 ~ 2236106 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 357936 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 2173571 | 6480743 ~ 6483986 (-) |
| G422354 | NA | other | upstream | 2327206 | 6631086 ~ 6631499 (-) |
| G422378 | NA | other | upstream | 2440799 | 6744679 ~ 6783046 (-) |
| G422810 | NA | other | upstream | 3326279 | 7630159 ~ 7652703 (-) |
