G420513


Basic Information

Item Value
gene id G420513
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4308819 ~ 4309407 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482987
CGCTAGTCACTATAGCAACTCATTACCCTCACCTATTTCTTGTGCCAGCCTTGTTATCTTGTGTATTTTTACCACAGTGTTTTTTATGTTCTTTTTATAAAACGGTTAGTTCCTGTCCTTGATTCCGATCGGTCAATAGCTGTGTTTTATTCACAATAAAACAAGGCTATGATCGCTTCACCCAATGGTTCAGTGTATGACTACACAACACCCTTAGCAACCACTCTTAGCAACGTAAACTGTTCGTTCTCAGTTGATATTGTTCATTGAAGCTTACTGTATTACGTACAAGAGTATTGTGAGAAAGAGATCGAGTGAGCGAGTTTATTACCTGCATTCAGATTTAGCATTTTCCTTCAGGTCAGTCCTATGTTCATAATAAAAAATCTGTTTAAATGTCCAATGTATTATCTTGTCCTTTTAACAGTTAAGGGGTTTTCCCGTGACTGACAGCGCTAGTCAAAGCATTTGTCAGTTGCGTCTTGTTCCGTGTTCACAACAATTCAGTCTTTTCAATGTAAAAGTCTTCGCTACTGACTGACACACTCATAAAGACAGTCTTTGCCGCCATCTAATGGCGTAATAATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482987 True 589 lncRNA 0.38 1 4308819 4309407

Neighbor

gene id symbol gene type direction distance location
CI01000304_04236578_04239825 NA coding upstream 68424 4236338 ~ 4240395 (+)
CI01000304_04223309_04223602 NA coding upstream 85050 4223309 ~ 4223769 (+)
CI01000304_04190428_04208535 NA coding upstream 100121 4190428 ~ 4208698 (+)
CI01000304_04170630_04190266 NA coding upstream 118553 4170630 ~ 4190266 (+)
CI01000304_03984177_03996203 KATNAL2 coding upstream 312418 3984177 ~ 3996401 (+)
CI01000304_04318151_04331824 SH3BP2 coding downstream 8744 4318151 ~ 4331892 (+)
CI01000304_04346530_04362348 VLDLR coding downstream 37123 4346530 ~ 4363156 (+)
CI01000304_04365876_04367947 KCNV2, KCNV2A coding downstream 56204 4365611 ~ 4368201 (+)
CI01000304_04381131_04396006 TRAPPC13 coding downstream 71724 4381131 ~ 4396075 (+)
CI01000304_04407815_04421342 NLN coding downstream 97947 4407354 ~ 4421434 (+)
G420504 NA non-coding upstream 14880 4293565 ~ 4293939 (+)
G420436 NA non-coding upstream 33573 4233809 ~ 4275246 (+)
G420438 NA non-coding upstream 43618 4263448 ~ 4265201 (+)
G420466 NA non-coding upstream 201261 4107238 ~ 4107558 (+)
G420464 NA non-coding upstream 202942 4105637 ~ 4105877 (+)
G420642 NA non-coding downstream 242659 4552066 ~ 4552528 (+)
G420655 NA non-coding downstream 310715 4620122 ~ 4620710 (+)
G420663 NA non-coding downstream 322923 4632330 ~ 4632603 (+)
G420556 NA non-coding downstream 330056 4639463 ~ 4645086 (+)
G420673 NA non-coding downstream 361156 4670563 ~ 4670788 (+)
G420445 NA other upstream 4987 4303336 ~ 4303832 (+)
G418981 NA other upstream 2215141 2092494 ~ 2093678 (+)
G418116 NA other upstream 3433570 872670 ~ 875249 (+)
G418059 NA other upstream 3744368 558092 ~ 564451 (+)
G417987 NA other upstream 4080966 226703 ~ 227853 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 863816 5173426 ~ 5176791 (+)
G421162 NA other downstream 1931826 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3043242 7352621 ~ 7354396 (+)
G421435 NA other downstream 3174734 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 3669221 7979078 ~ 7980735 (+)

Expression


Co-expression Network