G420685


Basic Information

Item Value
gene id G420685
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4798682 ~ 4798933 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483178
TGAAAAATAGCTCATGCATAGTATTACACAAAAGCAGTTCTCAATAAGCAAGCAATGTTCCATTGCTACCAAACTGCAGTACTGTGCTTGTTGATAACAAACAAAAACAAAGACCGTAAGAGGTCTAGTTGTTTTTAATGATTGACTCCTAGTGCTCAGTGGAAAGATGGCTTATGGAGACATCTACAGCCCAGTACTACAAGCACCAGTCAGGGTGCAGTTGTCCATCTGGAGCAATCTGGGCAACATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483178 True 252 lncRNA 0.41 1 4798682 4798933

Neighbor

gene id symbol gene type direction distance location
CI01000304_04708075_04768393 ADAMTS6 coding upstream 30101 4707405 ~ 4768581 (+)
CI01000304_04687431_04705845 ADAMTS6 coding upstream 92740 4687431 ~ 4705942 (+)
CI01000304_04679406_04680031 NA coding upstream 118645 4679300 ~ 4680037 (+)
CI01000304_04650911_04659754 TRIM23 coding upstream 138226 4650911 ~ 4660456 (+)
CI01000304_04563922_04573450 NA coding upstream 225232 4563709 ~ 4573450 (+)
CI01000304_04866074_04866590 PLAC8.1 coding downstream 66053 4864986 ~ 4867070 (+)
CI01000304_04876496_04883240 NA coding downstream 77403 4876336 ~ 4883702 (+)
CI01000304_04902333_04911640 LIN54 coding downstream 101282 4900215 ~ 4911778 (+)
CI01000304_04989817_04997932 NA coding downstream 189429 4988362 ~ 4997932 (+)
CI01000304_05085761_05095609 AK3 coding downstream 286663 5085596 ~ 5096251 (+)
G420677 NA non-coding upstream 12716 4785703 ~ 4785966 (+)
G420622 NA non-coding upstream 13426 4784929 ~ 4785256 (+)
G420554 NA non-coding upstream 125742 4672434 ~ 4672940 (+)
G420673 NA non-coding upstream 127894 4670563 ~ 4670788 (+)
G420556 NA non-coding upstream 153596 4639463 ~ 4645086 (+)
G420687 NA non-coding downstream 1303 4800236 ~ 4800567 (+)
G420690 NA non-coding downstream 3246 4802179 ~ 4802402 (+)
G420692 NA non-coding downstream 7873 4806806 ~ 4807219 (+)
G420693 NA non-coding downstream 8431 4807364 ~ 4807844 (+)
G420694 NA non-coding downstream 8925 4807858 ~ 4808057 (+)
G420445 NA other upstream 494850 4303336 ~ 4303832 (+)
G418981 NA other upstream 2705004 2092494 ~ 2093678 (+)
G418116 NA other upstream 3923433 872670 ~ 875249 (+)
G418059 NA other upstream 4234231 558092 ~ 564451 (+)
G417987 NA other upstream 4570829 226703 ~ 227853 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 374290 5173426 ~ 5176791 (+)
G421162 NA other downstream 1442300 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 2553716 7352621 ~ 7354396 (+)
G421435 NA other downstream 2685208 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 3179695 7979078 ~ 7980735 (+)

Expression


Co-expression Network