G420687


Basic Information

Item Value
gene id G420687
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4800236 ~ 4800567 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483180
CACGCTGTTATCGGTGCACACAGACGCACATACATACAAGGCTCGCGCGCACACAGAGAAAGAGAGAGAGGCGCGTTTCAGATAGCTCGCAAACTCCAAATTGATTTCTCTTTCGCGTCCTCAATGCACTTGGATGGACACATACACGCATTATGTCAGTCAAAATACCCCTCTCGGCAAGTATTCTCGTAAACACATTCGGTTATGTCTTAATTGAACAAGGTGAGAATTCGGATGTGTATCTATCGGATGTGTGCGTGCATGGGGTCTTACTCTTAAAGTGACAGCAACCTATAAATACCTGCTGTTGTCTGCCATGTAAATCAAACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483180 True 332 lncRNA 0.45 1 4800236 4800567

Neighbor

gene id symbol gene type direction distance location
CI01000304_04708075_04768393 ADAMTS6 coding upstream 31655 4707405 ~ 4768581 (+)
CI01000304_04687431_04705845 ADAMTS6 coding upstream 94294 4687431 ~ 4705942 (+)
CI01000304_04679406_04680031 NA coding upstream 120199 4679300 ~ 4680037 (+)
CI01000304_04650911_04659754 TRIM23 coding upstream 139780 4650911 ~ 4660456 (+)
CI01000304_04563922_04573450 NA coding upstream 226786 4563709 ~ 4573450 (+)
CI01000304_04866074_04866590 PLAC8.1 coding downstream 64419 4864986 ~ 4867070 (+)
CI01000304_04876496_04883240 NA coding downstream 75769 4876336 ~ 4883702 (+)
CI01000304_04902333_04911640 LIN54 coding downstream 99648 4900215 ~ 4911778 (+)
CI01000304_04989817_04997932 NA coding downstream 187795 4988362 ~ 4997932 (+)
CI01000304_05085761_05095609 AK3 coding downstream 285029 5085596 ~ 5096251 (+)
G420685 NA non-coding upstream 1303 4798682 ~ 4798933 (+)
G420677 NA non-coding upstream 14270 4785703 ~ 4785966 (+)
G420622 NA non-coding upstream 14980 4784929 ~ 4785256 (+)
G420554 NA non-coding upstream 127296 4672434 ~ 4672940 (+)
G420673 NA non-coding upstream 129448 4670563 ~ 4670788 (+)
G420690 NA non-coding downstream 1612 4802179 ~ 4802402 (+)
G420692 NA non-coding downstream 6239 4806806 ~ 4807219 (+)
G420693 NA non-coding downstream 6797 4807364 ~ 4807844 (+)
G420694 NA non-coding downstream 7291 4807858 ~ 4808057 (+)
G420615 NA non-coding downstream 62816 4863383 ~ 4863859 (+)
G420445 NA other upstream 496404 4303336 ~ 4303832 (+)
G418981 NA other upstream 2706558 2092494 ~ 2093678 (+)
G418116 NA other upstream 3924987 872670 ~ 875249 (+)
G418059 NA other upstream 4235785 558092 ~ 564451 (+)
G417987 NA other upstream 4572383 226703 ~ 227853 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 372656 5173426 ~ 5176791 (+)
G421162 NA other downstream 1440666 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 2552082 7352621 ~ 7354396 (+)
G421435 NA other downstream 2683574 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 3178061 7979078 ~ 7980735 (+)

Expression


Co-expression Network