G420692


Basic Information

Item Value
gene id G420692
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4806806 ~ 4807219 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483185
CACAAATTAAGAAATTAGCCACAACTTAATTATTGTGGCCAAGATTTAATTAAATTAAAACTAGGGAACAAATTAATCAAATGTGGTCATAATTTAATTAATCGAGTCATGTGAACAAATTCTAGGACTAGTTCACCCAAAAACTAAAATTCTGTCATCATTTACTCACTCTCAAGCTGTTTCAAAGCTGTATGACTTTTGTTCTTCTGTTGAACACAAAAGAAGATATTTTGAAGAATGTAGTTTTTTTTTTCTTATGTAAAAGAATTATTATATGAAGGATATCGCACTCCACCTACAGTATATAGACAGCAACTCCCCTTCCATACATCTAGCATAATTTATCAGATCAGTCCCTGTTATGTTTAGGAACAACCCTGAACGTGTCCATGGTGTAATGATGTGTTGAAATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483185 True 414 lncRNA 0.32 1 4806806 4807219

Neighbor

gene id symbol gene type direction distance location
CI01000304_04708075_04768393 ADAMTS6 coding upstream 38225 4707405 ~ 4768581 (+)
CI01000304_04687431_04705845 ADAMTS6 coding upstream 100864 4687431 ~ 4705942 (+)
CI01000304_04679406_04680031 NA coding upstream 126769 4679300 ~ 4680037 (+)
CI01000304_04650911_04659754 TRIM23 coding upstream 146350 4650911 ~ 4660456 (+)
CI01000304_04563922_04573450 NA coding upstream 233356 4563709 ~ 4573450 (+)
CI01000304_04866074_04866590 PLAC8.1 coding downstream 57767 4864986 ~ 4867070 (+)
CI01000304_04876496_04883240 NA coding downstream 69117 4876336 ~ 4883702 (+)
CI01000304_04902333_04911640 LIN54 coding downstream 92996 4900215 ~ 4911778 (+)
CI01000304_04989817_04997932 NA coding downstream 181143 4988362 ~ 4997932 (+)
CI01000304_05085761_05095609 AK3 coding downstream 278377 5085596 ~ 5096251 (+)
G420690 NA non-coding upstream 4404 4802179 ~ 4802402 (+)
G420687 NA non-coding upstream 6239 4800236 ~ 4800567 (+)
G420685 NA non-coding upstream 7873 4798682 ~ 4798933 (+)
G420677 NA non-coding upstream 20840 4785703 ~ 4785966 (+)
G420622 NA non-coding upstream 21550 4784929 ~ 4785256 (+)
G420693 NA non-coding downstream 145 4807364 ~ 4807844 (+)
G420694 NA non-coding downstream 639 4807858 ~ 4808057 (+)
G420615 NA non-coding downstream 56164 4863383 ~ 4863859 (+)
G420728 NA non-coding downstream 64008 4871227 ~ 4873291 (+)
G420542 NA non-coding downstream 108916 4916135 ~ 4916905 (+)
G420445 NA other upstream 502974 4303336 ~ 4303832 (+)
G418981 NA other upstream 2713128 2092494 ~ 2093678 (+)
G418116 NA other upstream 3931557 872670 ~ 875249 (+)
G418059 NA other upstream 4242355 558092 ~ 564451 (+)
G417987 NA other upstream 4578953 226703 ~ 227853 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 366004 5173426 ~ 5176791 (+)
G421162 NA other downstream 1434014 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 2545430 7352621 ~ 7354396 (+)
G421435 NA other downstream 2676922 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 3171409 7979078 ~ 7980735 (+)

Expression


Co-expression Network