G420735


Basic Information

Item Value
gene id G420735
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4926288 ~ 4926510 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU483228
CAAACACTGGTAACAGTTTTTTCATACAACAAAATTTTAGAAATAGCCACAGTTTTCTTTTATTAGATTTTATTATTTTTATTTATTAGCTTTATTTATTAATTTTTATTAGAGTACCAGAGCAGGTGAGTTAAGTGGAGCGGTGTGACGCTCCGCTCAATATTCAGCTCTTTGCCAGTGCGCTCTGCTCAGTCGCTCACAGCACAAGCGAACTCTGCACTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU483228 True 223 lncRNA 0.37 1 4926288 4926510

Neighbor

gene id symbol gene type direction distance location
CI01000304_04902333_04911640 LIN54 coding upstream 14510 4900215 ~ 4911778 (+)
CI01000304_04876496_04883240 NA coding upstream 42586 4876336 ~ 4883702 (+)
CI01000304_04866074_04866590 PLAC8.1 coding upstream 59218 4864986 ~ 4867070 (+)
CI01000304_04708075_04768393 ADAMTS6 coding upstream 157707 4707405 ~ 4768581 (+)
CI01000304_04687431_04705845 ADAMTS6 coding upstream 220346 4687431 ~ 4705942 (+)
CI01000304_04989817_04997932 NA coding downstream 61852 4988362 ~ 4997932 (+)
CI01000304_05085761_05095609 AK3 coding downstream 159086 5085596 ~ 5096251 (+)
CI01000304_05122605_05137890 EXD3 coding downstream 196095 5122605 ~ 5138169 (+)
CI01000304_05149465_05165999 NA coding downstream 222187 5148697 ~ 5166172 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB coding downstream 247167 5173426 ~ 5176791 (+)
G420561 NA non-coding upstream 1779 4924209 ~ 4924509 (+)
G420543 NA non-coding upstream 3865 4919371 ~ 4922423 (+)
G420542 NA non-coding upstream 9383 4916135 ~ 4916905 (+)
G420728 NA non-coding upstream 52997 4871227 ~ 4873291 (+)
G420615 NA non-coding upstream 62429 4863383 ~ 4863859 (+)
G420736 NA non-coding downstream 205 4926715 ~ 4927094 (+)
G420737 NA non-coding downstream 1394 4927904 ~ 4928306 (+)
G420738 NA non-coding downstream 1913 4928423 ~ 4928940 (+)
G420739 NA non-coding downstream 2779 4929289 ~ 4929557 (+)
G420548 NA non-coding downstream 4617 4931127 ~ 4932115 (+)
G420445 NA other upstream 622456 4303336 ~ 4303832 (+)
G418981 NA other upstream 2832610 2092494 ~ 2093678 (+)
G418116 NA other upstream 4051039 872670 ~ 875249 (+)
G418059 NA other upstream 4361837 558092 ~ 564451 (+)
G417987 NA other upstream 4698435 226703 ~ 227853 (+)
G421162 NA other downstream 1314723 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 2426139 7352621 ~ 7354396 (+)
G421435 NA other downstream 2557631 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 3052118 7979078 ~ 7980735 (+)

Expression


Co-expression Network